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SCN18_30_10_14_R2_B_scaffold_7583

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_7583_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..261
DNA (261bp) protein (87aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3KAW2_9RHIZ
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:EMG52340.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
binding--dependent transport system inner membrane component family protein
SCN18_30_10_14_R2_B_scaffold_7583_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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258..1097
DNA (840bp) protein (280aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQ49_9RHIZ
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KFG68651.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
binding-protein-dependent transport system inner membrane protein
SCN18_30_10_14_R2_B_scaffold_7583_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1114..1638
DNA (525bp) protein (175aa)
HAD family hydrolase n=3 Tax=Ochrobactrum RepID=C4WLS6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFG68649.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
cyclic phosphodiesterase-like family protein
SCN18_30_10_14_R2_B_scaffold_7583_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1811..3310
DNA (1500bp) protein (500aa)
UPI0003D06596 related cluster n=1 Tax=unknown RepID=UPI0003D06596
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
RNA polymerase sigma-54 factor RpoN
SCN18_30_10_14_R2_B_scaffold_7583_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3670..4254
DNA (585bp) protein (195aa)
Sigma-54 modulation protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C110_9RHIZ
Sigma-54 modulation protein {ECO:0000313|EMBL:EIM75512.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
sigma-54 modulation protein
SCN18_30_10_14_R2_B_scaffold_7583_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4329..4793
DNA (465bp) protein (155aa)
nitrogen regulatory protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379493B
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:EKF44404.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
SCN18_30_10_14_R2_B_scaffold_7583_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4870..5121)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C107_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM75509.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
Displaying 7 items

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