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SCN18_30_10_14_R2_B_scaffold_7782

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_7782_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..458
DNA (456bp) protein (152aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037D4548
Extracellular solute-binding protein family 5
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:CDN51104.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_30_10_14_R2_B_scaffold_7782_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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735..1409
DNA (675bp) protein (225aa)
ABC transporter n=1 Tax=Rhizobium leguminosarum RepID=UPI0003677F79
ABC transporter {ECO:0000313|EMBL:KGD99999.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
peptide ABC transporter
SCN18_30_10_14_R2_B_scaffold_7782_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1402..2226
DNA (825bp) protein (275aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. CF142 RepID=J2LEZ2_9RHIZ
Peptide ABC transporter permease {ECO:0000313|EMBL:KGE00141.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
yddQ; Inner membrane ABC transporter permease protein YddQ
SCN18_30_10_14_R2_B_scaffold_7782_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2237..3898
DNA (1662bp) protein (554aa)
ATPase component of various ABC-type transport systems with duplicated ATPase domain n=1 Tax=Rhizobium sp. CF142 RepID=J2B6G1_9RHIZ
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:EJJ31650.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
gsiA; Glutathione ABC transporter, ATP-binding protein GsiA
SCN18_30_10_14_R2_B_scaffold_7782_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3904..5124
DNA (1221bp) protein (407aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Rhizobium sp. AP16 RepID=J2CSC5_9RHIZ
Acetylornithine deacetylase {ECO:0000313|EMBL:KEA08099.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
SCN18_30_10_14_R2_B_scaffold_7782_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5130..5849
DNA (720bp) protein (240aa)
peptidase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035D382A
yqhT; Uncharacterized peptidase YqhT
Uncharacterized peptidase YqhT {ECO:0000313|EMBL:CDN51109.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCN18_30_10_14_R2_B_scaffold_7782_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5846..6247
DNA (402bp) protein (134aa)
Xaa-Pro aminopeptidase n=1 Tax=Rhizobium sp. CF142 RepID=J2LDP0_9RHIZ
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EJJ31652.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
yqhT; Uncharacterized peptidase YqhT
SCN18_30_10_14_R2_B_scaffold_7782_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6334..6495)
DNA (162bp) protein (54aa)
Transposase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98A49_RHILO
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ABS68142.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_30_10_14_R2_B_scaffold_7782_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6920..8500
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J1TA94_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ28671.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
Displaying 9 items

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