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SCN18_30_10_14_R2_B_scaffold_10504

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_10504_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..220)
DNA (219bp) protein (73aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAP9_ACIET
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KJS27257.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen
SCN18_30_10_14_R2_B_scaffold_10504_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(223..816)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003658DD9
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_63_12_curated
SCN18_30_10_14_R2_B_scaffold_10504_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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895..1473
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036AA84F
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABE61546.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCN18_30_10_14_R2_B_scaffold_10504_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1500..2153)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Pseudomonas mandelii RepID=UPI0003667E5C
Uncharacterized protein {ECO:0000313|EMBL:EJM63716.1}; TaxID=1144332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM50.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_10504_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2190..3395)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IW62_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIF34964.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_10504_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3498..3761
DNA (264bp) protein (88aa)
membrane protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B41320
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV12026.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCN18_30_10_14_R2_B_scaffold_10504_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3845..4423
DNA (579bp) protein (193aa)
2'-5' RNA ligase (EC:6.5.1.-)
2''''-5'''' RNA ligase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034CD497
2'-5' RNA ligase {ECO:0000313|EMBL:ETR74852.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCN18_30_10_14_R2_B_scaffold_10504_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4501..4947
DNA (447bp) protein (149aa)
Homoprotocatechuate degradation operon regulator, HpaR n=1 Tax=Brucella inopinata BO1 RepID=E0DPX4_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KFL28320.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hpaR; homoprotocatechuate degradation operon regulator, HpaR
SCN18_30_10_14_R2_B_scaffold_10504_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4971..5777)
DNA (807bp) protein (269aa)
2-oxo-hepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:EFM56002.1}; EC=4.2.-.- {ECO:0000313|EMBL:EFM56002.1};; TaxID=470735 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella inopinata BO1.;"
2-oxo-hepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Brucella inopinata BO1 RepID=E0DPW9_9RHIZ
hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase
SCN18_30_10_14_R2_B_scaffold_10504_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5774..6655)
DNA (882bp) protein (294aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0USP0_RHILV
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:EJC64041.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
2-oxo-hepta-3-ene-1,7-dioic acid hydratase
SCN18_30_10_14_R2_B_scaffold_10504_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6666..7112)
DNA (447bp) protein (149aa)
L-2,4-diaminobutyrate decarboxylase Ddc {ECO:0000313|EMBL:EYR82560.1}; EC=4.1.1.86 {ECO:0000313|EMBL:EYR82560.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
L-2,4-diaminobutyrate decarboxylase Ddc n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW53_9RHIZ
pyridoxal-dependent decarboxylase
Displaying 11 items

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