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SCN18_30_10_14_R2_B_scaffold_5520

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_5520_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..342)
DNA (342bp) protein (114aa)
AttA2-like ABC transporter permease n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BVL4_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:KKB82839.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
AttA2-like ABC transporter permease
SCN18_30_10_14_R2_B_scaffold_5520_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(431..1450)
DNA (1020bp) protein (340aa)
UPI0003CF08B3 related cluster n=2 Tax=unknown RepID=UPI0003CF08B3
Uncharacterized protein {ECO:0000313|EMBL:ESY85093.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_5520_3
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1520..2146)
DNA (627bp) protein (209aa)
Gll0959 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NM10_GLOVI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
SCN18_30_10_14_R2_B_scaffold_5520_4
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2500..3561
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002EC4A40
Transporter {ECO:0000313|EMBL:KGJ20847.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
dctP3; TRAP transporter subunit DctP
SCN18_30_10_14_R2_B_scaffold_5520_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3572..4123
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031FD489
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:KGI94428.1}; TaxID=658612 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. H2.;"
TRAP C4-dicarboxylate transport system subunit DctQ
SCN18_30_10_14_R2_B_scaffold_5520_6
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4120..5406
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031DC143
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EDQ33541.1}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_5520_7
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5458..6711)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00035CA1AB
Uncharacterized protein {ECO:0000313|EMBL:EJE51836.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_5520_8
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6764..6979
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036C2008
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:ESS59607.1}; TaxID=1399146 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae S611.;"
LacI family transcriptional regulator
Displaying 8 items

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