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SCN18_30_10_14_R2_B_scaffold_5761

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_5761_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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77..481
DNA (405bp) protein (135aa)
UPI0003CED0DC related cluster n=1 Tax=unknown RepID=UPI0003CED0DC
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:ESX83708.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
methylmalonyl-CoA epimerase
SCN18_30_10_14_R2_B_scaffold_5761_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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505..771
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. RepID=L0NFB5_RHISP
Uncharacterized protein {ECO:0000313|EMBL:GAK71113.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
putative secreted protein
SCN18_30_10_14_R2_B_scaffold_5761_trna_1
unknown

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942..1023
DNA (82bp)
transferRNA Tyr
SCN18_30_10_14_R2_B_scaffold_5761_trna_2
unknown

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1058..1128
DNA (71bp)
transferRNA Gly
SCN18_30_10_14_R2_B_scaffold_5761_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1176..1394)
DNA (219bp) protein (73aa)
SCN18_30_10_14_R2_B_scaffold_5761_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1640..2815
DNA (1176bp) protein (392aa)
Elongation factor Tu n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KN86_MESAW
translation elongation factor TU
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCN18_30_10_14_R2_B_scaffold_5761_trna_3
unknown

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2915..2987
DNA (73bp)
transferRNA Trp
SCN18_30_10_14_R2_B_scaffold_5761_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3254..3457
DNA (204bp) protein (68aa)
Protein translocase subunit SecE n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQR7_9RHIZ
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
secE; preprotein translocase, SecE subunit
SCN18_30_10_14_R2_B_scaffold_5761_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3485..4012
DNA (528bp) protein (176aa)
Transcription termination/antitermination protein NusG n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV88_9RHIZ
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NusG antitermination factor
SCN18_30_10_14_R2_B_scaffold_5761_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4183..4611
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2M782_9RHIZ
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCN18_30_10_14_R2_B_scaffold_5761_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4616..5320
DNA (705bp) protein (235aa)
50S ribosomal protein L1 n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BQS0_9RHIZ
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
rplA; 50S ribosomal protein L1
SCN18_30_10_14_R2_B_scaffold_5761_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5696..6214
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MIA7_9RHIZ
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
rplJ; 50S ribosomal protein L10
SCN18_30_10_14_R2_B_scaffold_5761_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6269..6397
DNA (129bp) protein (43aa)
50S ribosomal protein L7 n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000376A30C
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
Displaying 13 items

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