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SCN18_30_10_14_R2_B_scaffold_9393

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_9393_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1548
DNA (1548bp) protein (516aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
ribonuclease R n=1 Tax=Rhizobium loti RepID=UPI00036991F9
ribonuclease R
SCN18_30_10_14_R2_B_scaffold_9393_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1548..1985
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8J4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11946.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_9393_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2058..2633
DNA (576bp) protein (192aa)
NUDIX hydrolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVR9_9RHIZ
NUDIX hydrolase {ECO:0000313|EMBL:EHK55191.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
NUDIX family protein
SCN18_30_10_14_R2_B_scaffold_9393_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2803..2970
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Methylopila sp. M107 RepID=UPI00037EBC1B
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
50S ribosomal protein L33
SCN18_30_10_14_R2_B_scaffold_9393_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3086..3253
DNA (168bp) protein (56aa)
SCN18_30_10_14_R2_B_scaffold_9393_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3320..4795)
DNA (1476bp) protein (492aa)
RNA helicase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI000301D30B
RNA helicase {ECO:0000313|EMBL:CDX21820.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
DNA/RNA helicase, superfamily II
SCN18_30_10_14_R2_B_scaffold_9393_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5131..5358
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU68_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV07448.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
SCN18_30_10_14_R2_B_scaffold_9393_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5371..5931)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FAF4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV13425.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_9393_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5928..6263)
DNA (336bp) protein (112aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVU0_9RHIZ
SCN18_30_10_14_R2_B_scaffold_9393_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6302..7102)
DNA (801bp) protein (267aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
threonine dehydratase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BD374
threonine dehydratase
SCN18_30_10_14_R2_B_scaffold_9393_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7119..8633)
DNA (1515bp) protein (505aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Adenine deaminase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EPE1_9RHIZ
adenine deaminase
Displaying 11 items

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