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SCN18_30_10_14_R2_B_scaffold_4232_6

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(4286..5194)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator LacI family id=3932092 bin=GWC2_Methylomirabilis_70_16 species=Grimontia hollisae genus=Grimontia taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 301.0
  • Bit_score: 308
  • Evalue 3.90e-81
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 302.0
  • Bit_score: 285
  • Evalue 1.30e-74
Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 301.0
  • Bit_score: 308
  • Evalue 5.40e-81

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGCGCGTCGAGCACGCTGTGCGCGAGCGCGGCTATATCCGGCACGGTGCGGCAAGGGCGCTGTCGATGCGCCAGTCGCACGCCATCGGGGCGATCATTCCCACTGTCGACAATGCTACCCGCGCCAGCAAGGTGGCGGCGCTGCAGAAGCGTTGCCGGGAGCGCGGCTACAATGTCCTCTTGGCTTTGTTCGAATATGATCTGGAACTGGAACTGGTTCAATGCCGGAACCTCATAGAGGCAGGCGTGGACGGGCTTATGCTGGAAGGTGAACTGCACCACCCCGCGCTCTACCAGCTCATGGAAAAGCGCGGCATTCCCTTCGTAAACACCGCCATTTACGATCCGCGCTCGCCCCATCCCAATATCGGTTTCGACAACCAGGCCGCCGCGGCGCGACTGACCGAGCATCTGCTCGACCTCGGCCACCGGGTCTTCGCGATGATCGCCGGCCCCAACCAGGTCAGCGACCGCGCCAGCGGCCGTGTGAAGGGCGTGCGCCGGGCGCTTGCGGCACGTGGGCTTGATCTGCCCGCGGAGAGGACCATCGAGGGTCCGTACCGGGTCCAGCAGGGGCGGCAGGGGTTGAGGGCGCTGATGGGCGGCGAGCCGCGCCCGACGGCTATAGTATGCGGCAACGACGTGCTCGCTTTCGGCGCGCTGCTGGAAGCACAGGCGCTTGGATGTCGCGTGCCGCAGGACCTTTCCATAGCCGGGTTCGATGATCTCGACTGGGCATCGCAATTGCCTCCGGGCCTGACGACAATGGCGCTGCCGGCCTGGGAGATCGGCCAGTTGGCGGCGGACCATCTTATCGACAGCATCGCCGGGCAGACTGTCACCCATTCGACGGAAGTCGAGGTGAGACTGATCCTGCGAGGCTCGACGGGGCCGGCTCCGGAAAGTTGA
PROTEIN sequence
Length: 303
MRVEHAVRERGYIRHGAARALSMRQSHAIGAIIPTVDNATRASKVAALQKRCRERGYNVLLALFEYDLELELVQCRNLIEAGVDGLMLEGELHHPALYQLMEKRGIPFVNTAIYDPRSPHPNIGFDNQAAAARLTEHLLDLGHRVFAMIAGPNQVSDRASGRVKGVRRALAARGLDLPAERTIEGPYRVQQGRQGLRALMGGEPRPTAIVCGNDVLAFGALLEAQALGCRVPQDLSIAGFDDLDWASQLPPGLTTMALPAWEIGQLAADHLIDSIAGQTVTHSTEVEVRLILRGSTGPAPES*