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SCN18_30_10_14_R2_B_scaffold_4232

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_4232_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(102..851)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037F9685
lactose ABC transporter permease
Lactose ABC transporter permease {ECO:0000313|EMBL:AIF44422.1}; TaxID=403957 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. SK37.;"
SCN18_30_10_14_R2_B_scaffold_4232_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(853..1815)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036C2DEB
putative ABC transporter permease protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:AGE22475.1}; TaxID=1233873 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. GHH01.;"
SCN18_30_10_14_R2_B_scaffold_4232_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1831..2052)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000362E427
SCN18_30_10_14_R2_B_scaffold_4232_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2071..3081)
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000362E427
carbohydrate ABC transporter substrate-binding protein
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:AFZ15427.1}; Flags: Precursor;; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
SCN18_30_10_14_R2_B_scaffold_4232_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3140..4186)
DNA (1047bp) protein (349aa)
Oxidoreductase domain protein n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SJY8_PLABD
oxidoreductase
Oxidoreductase domain protein {ECO:0000313|EMBL:ADY58677.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
SCN18_30_10_14_R2_B_scaffold_4232_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4286..5194)
DNA (909bp) protein (303aa)
Transcriptional regulator LacI family id=3932092 bin=GWC2_Methylomirabilis_70_16 species=Grimontia hollisae genus=Grimontia taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
SCN18_30_10_14_R2_B_scaffold_4232_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5465..6559
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036B1081
ABC transporter ATP-binding protein
Putative multiple sugar-binding protein transport ATP-binding protein msmX {ECO:0000313|EMBL:KGJ70156.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCN18_30_10_14_R2_B_scaffold_4232_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6569..7420
DNA (852bp) protein (284aa)
Glucosamine-6-phosphate isomerase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C381_9PLAN
6-phosphogluconolactonase/Glucosamine-6-phosphateisomerase/deaminase
Tax=CG_Arma_02
SCN18_30_10_14_R2_B_scaffold_4232_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7442..8119)
DNA (678bp) protein (226aa)
ilvD; Dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxyacid dehydratase/phosphogluconate dehydratase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXI5_9RHIZ
Dihydroxyacid dehydratase/phosphogluconate dehydratase {ECO:0000313|EMBL:EIM28677.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
Displaying 9 items

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