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SCN18_30_10_14_R2_B_scaffold_6886_1

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(1..537)

Top 3 Functional Annotations

Value Algorithm Source
lgrC; linear gramicidin synthase subunit C (EC:5.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 182.0
  • Bit_score: 139
  • Evalue 5.20e-31
Short chain dehydrogenase n=1 Tax=Nitratireductor indicus C115 RepID=K2P4N9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 179.0
  • Bit_score: 192
  • Evalue 3.10e-46
Short chain dehydrogenase {ECO:0000313|EMBL:EKF42341.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 179.0
  • Bit_score: 192
  • Evalue 4.40e-46

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGCAGCGGCTCGCGGGACGTGTGACGATCATCAGCGGGGGCGGGACCGGCATCGGTCGGGCAATTGCGATAGCTGCGGCTTCCGAGGGCGCGCATGTCATCGTCGCCGGCCGCAGCCGCTCGACCCTCGAGGAAGTTGCGTCGCTCACGGGTGGTCAGGCGGTCACCTGCGACGTCACCCAAATCGAGGAGGTCCAGGCGCTGTTTTCCGCCGCGCGCAGGATAACGGGCAAGGTGGACGTGCTGGTAAACAGTGCCGGACAGTCCGGTCCTCTCGAGCCGCTCGCCACGACGGACCTGGCTGCCTGGCGCACATGCATCGAGACCAATCTCTTTGGCGCAGTCAATTGCCTTCATGTCGCGGCAGACATCATGTGCTCGCAACGTTCCGGTTCGATCGTAAATATCTCTTCCCGGATGGGCCTCAGCGGCGCGCCCATGCGTAGCGCCTATGTAGCGAGCAAATTCGCACTCATCGGATTGACGCAATCGCTGGCCCAGGAGGTGGGAGAGTTTAGCGTGCGTGTGAATGCCGTC
PROTEIN sequence
Length: 179
MQRLAGRVTIISGGGTGIGRAIAIAAASEGAHVIVAGRSRSTLEEVASLTGGQAVTCDVTQIEEVQALFSAARRITGKVDVLVNSAGQSGPLEPLATTDLAAWRTCIETNLFGAVNCLHVAADIMCSQRSGSIVNISSRMGLSGAPMRSAYVASKFALIGLTQSLAQEVGEFSVRVNAV