ggKbase home page

SCN18_30_10_14_R2_B_scaffold_6886

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_6886_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..537)
DNA (537bp) protein (179aa)
lgrC; linear gramicidin synthase subunit C (EC:5.1.1.-)
Short chain dehydrogenase n=1 Tax=Nitratireductor indicus C115 RepID=K2P4N9_9RHIZ
Short chain dehydrogenase {ECO:0000313|EMBL:EKF42341.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCN18_30_10_14_R2_B_scaffold_6886_2
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(539..1582)
DNA (1044bp) protein (348aa)
spermidine/putrescine ABC transporter ATPase (EC:3.6.3.31)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Spermidine/putrescine ABC transporter ATPase subunit n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6EBG0_SINMK
SCN18_30_10_14_R2_B_scaffold_6886_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1579..3384)
DNA (1806bp) protein (602aa)
ABC transporter permease n=1 Tax=Rhizobium leguminosarum RepID=UPI00036B2168
spermidine/putrescine ABC transporter permease protein
Spermidine/putrescine ABC transporter permease protein {ECO:0000313|EMBL:AGS25316.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCN18_30_10_14_R2_B_scaffold_6886_4
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3384..4367)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Brevibacillus sp. phR RepID=UPI00036D9C66
succinylglutamate desuccinylase/aspartoacylase
Succinylglutamate desuccinylase/aspartoacylase {ECO:0000313|EMBL:KEC70901.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCN18_30_10_14_R2_B_scaffold_6886_5
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4410..5546)
DNA (1137bp) protein (379aa)
Extracellular solute-binding protein family 1 n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6EDM8_SINMK
Uncharacterized protein {ECO:0000313|EMBL:KEC70756.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
family 1 extracellular solute-binding protein
Displaying 5 items

View Taxonomy