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SCN18_30_10_14_R2_B_scaffold_5815_7

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(4838..5077)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I463_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 41.0
  • Coverage: 78.0
  • Bit_score: 64
  • Evalue 4.30e-08
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJN14463.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 78.0
  • Bit_score: 64
  • Evalue 6.10e-08
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 78.0
  • Bit_score: 62
  • Evalue 4.70e-08

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
TTGCTCGGCAAGGGGCTTCTCGGCGCCGGTATTTTCGCGATCGTGATGTCCTTCCACAACTTCACGGCGACGATGTTCCTTGTCGGAAACAAGCCGACCCTGCCCGTTGCGGCATACCAGTATATCCGCACCGAAAGCGACCCATCGGTTTGCGCCCTGTCGACGCTGATGATGCTCGGAGGGATCATCGCCGTCTACCTCATGGACAAATGGATCGGGCTCGAGAGGCTTGCACGATGA
PROTEIN sequence
Length: 80
LLGKGLLGAGIFAIVMSFHNFTATMFLVGNKPTLPVAAYQYIRTESDPSVCALSTLMMLGGIIAVYLMDKWIGLERLAR*