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SCN18_30_10_14_R2_B_scaffold_11126_1

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: comp(1..528)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: 50S ribosomal protein L6, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11566 similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 176.0
  • Bit_score: 314
  • Evalue 5.30e-83
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 176.0
  • Bit_score: 318
  • Evalue 5.20e-84
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 176.0
  • Bit_score: 311
  • Evalue 1.30e-82

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGTCTCGTATTGGAAAAAGGCCGGTCTCCGTGCCTCAGGGCGTCACCGCCACTGTCGACGGCCAGACCGTGACCGCGAAGGGTCCGAAGGGCGAGCTGAAATTCGTCGTCAACGACGACGTTCTGGTCAAGCTCGAGGACGGCCATATCAAGGTCGATCCGCGTGATCAGTCGAAGGCAGCGCGCTCCAAATGGGGCATGTCGCGCACGCAGATCGTCAACATCCTGACAGGCGTCAAGGATGGCTTCGAGAAGCGCCTGGAGATCAACGGCGTCGGTTACCGCGCGGCGATGCAGGGCAGGAACCTGCAGCTTGCGCTGGGCTTCAGCCACGACGTCGTCTACGAGACCCCGCAAGGGGTCACGATCGCGGTGCCGAAGCCGACCGAAATCGTCGTGTCGGGCATCGACAAGCAGGCTGTCGGGCAGGTTGCGGCGGAAATCCGCGAGTACCGTGGACCCGAGCCCTACAAGGGCAAGGGCGTCAAGTACGCGGACGAGCGGATTGTTCGCAAGGAAGGCAAGAAG
PROTEIN sequence
Length: 176
MSRIGKRPVSVPQGVTATVDGQTVTAKGPKGELKFVVNDDVLVKLEDGHIKVDPRDQSKAARSKWGMSRTQIVNILTGVKDGFEKRLEINGVGYRAAMQGRNLQLALGFSHDVVYETPQGVTIAVPKPTEIVVSGIDKQAVGQVAAEIREYRGPEPYKGKGVKYADERIVRKEGKK