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SCN18_30_10_14_R2_B_scaffold_11126

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_11126_1
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..528)
DNA (528bp) protein (176aa)
PREDICTED: 50S ribosomal protein L6, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11566
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
rplF; 50S ribosomal protein L6
SCN18_30_10_14_R2_B_scaffold_11126_2
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(562..960)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031240A6
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
30S ribosomal protein S8
SCN18_30_10_14_R2_B_scaffold_11126_3
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(973..1278)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Nitratireductor indicus C115 RepID=K2NLK9_9RHIZ
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
30S ribosomal protein S14
SCN18_30_10_14_R2_B_scaffold_11126_4
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1305..1862)
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=1 Tax=Nitratireductor indicus C115 RepID=K2NZ16_9RHIZ
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
rplE; 50S ribosomal protein L5
SCN18_30_10_14_R2_B_scaffold_11126_5
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1855..2169)
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FP39_9RHIZ
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
50S ribosomal protein L24
SCN18_30_10_14_R2_B_scaffold_11126_6
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2181..2549)
DNA (369bp) protein (123aa)
PREDICTED: 50S ribosomal protein L14, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C12D69
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
rplN; 50S ribosomal protein L14
SCN18_30_10_14_R2_B_scaffold_11126_7
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2612..2854)
DNA (243bp) protein (81aa)
30S ribosomal protein S17 n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HVB4_9RHIZ
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
30S ribosomal protein S17
SCN18_30_10_14_R2_B_scaffold_11126_8
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2865..3065)
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=1 Tax=Hoeflea sp. 108 RepID=UPI00036A4EE8
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
50S ribosomal protein L29
SCN18_30_10_14_R2_B_scaffold_11126_9
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3080..3493)
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMD1_MESCW
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
50S ribosomal protein L16
SCN18_30_10_14_R2_B_scaffold_11126_10
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3551..3808)
DNA (258bp) protein (86aa)
UPI0003CFA3FD related cluster n=1 Tax=unknown RepID=UPI0003CFA3FD
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
30S ribosomal protein S3
Displaying 10 items

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