ggKbase home page

SCN18_30_10_14_R2_B_scaffold_14895_4

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 1047..1511

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein bepC n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ERI2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 147.0
  • Bit_score: 183
  • Evalue 1.60e-43
Transporter {ECO:0000313|EMBL:EXL07836.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 126.0
  • Bit_score: 220
  • Evalue 1.30e-54
type I secretion outer membrane protein, TolC family similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 147.0
  • Bit_score: 177
  • Evalue 2.50e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGACTCGCAGAGCCGGTGCTTCGTCTTTTCGCAAGACGGGTTTTGCCATGTTCATGGCTGCGGCCGCGATACTATCGCCACCAGAAGCTTCCGCGGAGACGATCACCGGCGCGCTTTCCAAGGCTTATCGCAACAACGCCCAGCTCAATTCGGCACGCGCCGGCGTCAGGGTTACTGACGAAGATGTCGCCATTGCAAAGTCTGGCTACCGTCCCACAGTCACGGGATCGAGCAGCATTGACTACACTGAAATCCGGCGCAGCAACGATTCCACTCACCTTACTTCTGGTAGCTTCGGCGTGCAGATCAACCAGACCCTGTTTGACGGCTTCCAGACCCGGAGCAATGTCACGGCGGCGGAAGCACGTGTTCGCGCGTCGGTCGAAAGCTTGCGCAACACGGAGGGAAATATCCTCTTCAGGGGAAAAGGCATCCTATCCGATCTTCCGCCACAACGCCCGTGA
PROTEIN sequence
Length: 155
MTRRAGASSFRKTGFAMFMAAAAILSPPEASAETITGALSKAYRNNAQLNSARAGVRVTDEDVAIAKSGYRPTVTGSSSIDYTEIRRSNDSTHLTSGSFGVQINQTLFDGFQTRSNVTAAEARVRASVESLRNTEGNILFRGKGILSDLPPQRP*