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SCN18_30_10_14_R2_B_scaffold_14895

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_14895_1
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..161
DNA (159bp) protein (53aa)
Outer membrane efflux protein bepC n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ERI2_9RHIZ
Transporter {ECO:0000313|EMBL:EXL01712.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
TolC family type I secretion outer membrane protein
SCN18_30_10_14_R2_B_scaffold_14895_2
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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158..376
DNA (219bp) protein (73aa)
ABC transporter permease protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JDQ9_OLICO
ABC exporter transmembrane subunit, DevC protein {ECO:0000313|EMBL:CEG09645.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative permease
SCN18_30_10_14_R2_B_scaffold_14895_3
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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485..1000
DNA (516bp) protein (172aa)
Lipoprotein-releasing system ATP-binding protein LolD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXV3_9RHIZ
ABC transporter {ECO:0000313|EMBL:EZQ14990.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
putative macrolide export ATP-binding protein/permease MacB
SCN18_30_10_14_R2_B_scaffold_14895_4
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1047..1511
DNA (465bp) protein (155aa)
Outer membrane efflux protein bepC n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ERI2_9RHIZ
Transporter {ECO:0000313|EMBL:EXL07836.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
type I secretion outer membrane protein, TolC family
SCN18_30_10_14_R2_B_scaffold_14895_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, SCNPILOT_CONT_1000_BF_Rhizobiales_65_79, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1519..1737
DNA (219bp) protein (73aa)
UPI0003CEE5C5 related cluster n=1 Tax=unknown RepID=UPI0003CEE5C5
Multidrug transporter AcrB {ECO:0000313|EMBL:ESY68577.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
acriflavin resistance protein
SCN18_30_10_14_R2_B_scaffold_14895_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1740..2252
DNA (513bp) protein (171aa)
Nodulation protein NolG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGX1_9RHIZ
Acriflavin resistance protein {ECO:0000313|EMBL:CDX29230.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
acriflavin resistance protein
SCN18_30_10_14_R2_B_scaffold_14895_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2269..2655
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GXW8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CEJ16004.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_14895_8
SCNpilot_P_inoc_Acidovorax_64_34, SCNpilot_P_inoc_Acidovorax_64_34, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2851..3084
DNA (234bp) protein (78aa)
Site-specific recombinase XerD n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N4W1_RHILT
Site-specific recombinase XerD {ECO:0000313|EMBL:EJB01732.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
transposase number 1 for insertion sequence NGRIS-16d
SCN18_30_10_14_R2_B_scaffold_14895_9
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3081..3416
DNA (336bp) protein (112aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F122_9RHIZ
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCV10046.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
ECF subfamily RNA polymerase sigma-24 subunit
Displaying 9 items

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