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SCN18_30_10_14_R2_B_scaffold_14895_8

Organism: SCN18_30_10_14_R2_B_Rhizobiales_63_8

near complete RP 44 / 55 MC: 5 BSCG 48 / 51 MC: 8 ASCG 11 / 38 MC: 3
Location: 2851..3084

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase XerD n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9N4W1_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 65.0
  • Bit_score: 92
  • Evalue 1.90e-16
Site-specific recombinase XerD {ECO:0000313|EMBL:EJB01732.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 65.0
  • Bit_score: 92
  • Evalue 2.70e-16
transposase number 1 for insertion sequence NGRIS-16d similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 47.0
  • Bit_score: 91
  • Evalue 7.00e-17

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Taxonomy

SCNpilot_P_inoc_Acidovorax_64_34 → SCNpilot_P_inoc_Acidovorax_64_34 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGGCCGAGTTGAGCCCGCTTCGCCGGCGCATGATCGAGGACATGACGATCCGCAATCTGTCGCCGGCCACGCAACGATCCTACGTGCATGCGGTGGCGAAGTTTTCGCGTTATTTCGGCCGCTCGCCGGACCGGCTCGGCTGGAAGACGTCCGCGTCTTCCTCTTTTGTCCTGAGTGTTACCGTAGGGTCACATTGCAAGAGGCACGACACGCTGTATAAACCCGCCATATGA
PROTEIN sequence
Length: 78
MAELSPLRRRMIEDMTIRNLSPATQRSYVHAVAKFSRYFGRSPDRLGWKTSASSSFVLSVTVGSHCKRHDTLYKPAI*