ggKbase home page

SCN18_30_10_14_R5_P_scaffold_1506

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_1506_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..710)
DNA (708bp) protein (236aa)
AI2 transporter membrane component of ABC superfamily n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EEN9_9RHIZ
AI2 transporter membrane component of ABC superfamily {ECO:0000313|EMBL:CCV03124.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
inner-membrane translocator
SCN18_30_10_14_R5_P_scaffold_1506_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(707..1684)
DNA (978bp) protein (326aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporters n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KSU7_MESAW
permease component of ribose/xylose/arabinose/galactoside ABC-type transporters
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporters {ECO:0000313|EMBL:AGB48191.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCN18_30_10_14_R5_P_scaffold_1506_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1681..3222)
DNA (1542bp) protein (514aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UPI0003CEF3AE related cluster n=1 Tax=unknown RepID=UPI0003CEF3AE
sugar ABC transporter ATP-binding protein
SCN18_30_10_14_R5_P_scaffold_1506_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3286..4281)
DNA (996bp) protein (332aa)
ABC transporter substrate-binding protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FL47_9RHIZ
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESX77737.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
rhamnose ABC transporter periplasmic rhamnose-binding protein
SCN18_30_10_14_R5_P_scaffold_1506_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4337..5146)
DNA (810bp) protein (270aa)
UPI0003CFC073 related cluster n=1 Tax=unknown RepID=UPI0003CFC073
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:ESZ21815.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
DeoR family transcriptional regulator
SCN18_30_10_14_R5_P_scaffold_1506_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5335..7437
DNA (2103bp) protein (701aa)
Short-chain dehydrogenase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FHV6_9RHIZ
Short-chain dehydrogenase {ECO:0000313|EMBL:ESX77735.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
short chain dehydrogenase
SCN18_30_10_14_R5_P_scaffold_1506_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7462..8754
DNA (1293bp) protein (431aa)
UPI0003CE3722 related cluster n=1 Tax=unknown RepID=UPI0003CE3722
Sugar isomerase {ECO:0000313|EMBL:ESY79260.1}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
L-rhamnose catabolism isomerase
SCN18_30_10_14_R5_P_scaffold_1506_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9282..9890)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SL97_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP78128.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
lysine transporter LysE
Displaying 8 items

View Taxonomy