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SCN18_30_10_14_R5_P_scaffold_1648

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_1648_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(126..1115)
DNA (990bp) protein (330aa)
Putative ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJU5_MESAW
putative ABC-type transport system, periplasmic component/surface lipoprotein
Putative ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:AGB44303.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCN18_30_10_14_R5_P_scaffold_1648_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1324..1989)
DNA (666bp) protein (222aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EM86_9RHIZ
SCN18_30_10_14_R5_P_scaffold_1648_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2029..2493)
DNA (465bp) protein (155aa)
Signal peptide protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FMN3_9RHIZ
Signal peptide protein {ECO:0000313|EMBL:EZQ16328.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_1648_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2504..3430
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037CC7E4
Uncharacterized protein {ECO:0000313|EMBL:EZQ16327.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_1648_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3469..3564)
DNA (96bp) protein (32aa)
SCN18_30_10_14_R5_P_scaffold_1648_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3784..3963
DNA (180bp) protein (60aa)
Flp/Fap pilin component n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FE91_9RHIZ
Flp/Fap pilin component {ECO:0000313|EMBL:CCV15582.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
fimbriae associated protein
SCN18_30_10_14_R5_P_scaffold_1648_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4135..4455
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y6Q5_MESOW
Uncharacterized protein {ECO:0000313|EMBL:EZQ16325.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_1648_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4569..5030
DNA (462bp) protein (154aa)
PREDICTED: nudix hydrolase 18, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C12CE1
NUDIX hydrolase {ECO:0000313|EMBL:EXL09642.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
NUDIX hydrolase
SCN18_30_10_14_R5_P_scaffold_1648_9
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5033..5881)
DNA (849bp) protein (283aa)
UPI0003CEE29A related cluster n=1 Tax=unknown RepID=UPI0003CEE29A
citrate synthase
Citrate synthase {ECO:0000313|EMBL:ESY99351.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCN18_30_10_14_R5_P_scaffold_1648_10
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5878..7056)
DNA (1179bp) protein (393aa)
CoA-transferase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7F793_9RHIZ
CoA-transferase {ECO:0000313|EMBL:ESX26781.1}; TaxID=1287321 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC264A00.;"
putative acyl-CoA transferase/carnitine dehydratase
SCN18_30_10_14_R5_P_scaffold_1648_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7070..8593)
DNA (1524bp) protein (508aa)
tripartite tricarboxylate transporter TctA n=1 Tax=Rhizobium loti RepID=UPI000380BC92
Uncharacterized protein {ECO:0000313|EMBL:AID32469.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_1648_12
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8597..9100)
DNA (504bp) protein (168aa)
Putative tricarboxylic transport membrane protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EKW1_9RHIZ
Putative tricarboxylic transport membrane protein {ECO:0000313|EMBL:CCV05369.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
Tripartite tricarboxylate transporter TctB family
SCN18_30_10_14_R5_P_scaffold_1648_13
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10354..10593
DNA (240bp) protein (80aa)
UPI0003D019E2 related cluster n=1 Tax=unknown RepID=UPI0003D019E2
IclR family transcriptional regulator {ECO:0000313|EMBL:ESZ24497.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
transcriptional regulator
Displaying 13 items

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