ggKbase home page

SCN18_30_10_14_R5_P_scaffold_3399

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_3399_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..506)
DNA (504bp) protein (168aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
UPI0003CFD5FC related cluster n=1 Tax=unknown RepID=UPI0003CFD5FC
coproporphyrinogen III oxidase
SCN18_30_10_14_R5_P_scaffold_3399_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

607..756
DNA (150bp) protein (50aa)
Uncharacterized protein n=2 Tax=Mesorhizobium RepID=M5FMA1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH11254.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_3399_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(766..1203)
DNA (438bp) protein (146aa)
UPI0003CF8853 related cluster n=1 Tax=unknown RepID=UPI0003CF8853
MerR family transcriptional regulator {ECO:0000313|EMBL:ESX62979.1}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
MerR family transcriptional regulator
SCN18_30_10_14_R5_P_scaffold_3399_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1336..1794)
DNA (459bp) protein (153aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98HT6_RHILO
RNA methyltransferase
SCN18_30_10_14_R5_P_scaffold_3399_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2222..2602
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EV38_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV08839.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_3399_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2648..4498
DNA (1851bp) protein (617aa)
ABC transporter related protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YDE5_MESOW
Uncharacterized ABC transporter ATP-binding protein HI_1051 {ECO:0000313|EMBL:CDX28598.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC transporter
Displaying 6 items

View Taxonomy