ggKbase home page

SCN18_30_10_14_R5_P_scaffold_2501

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_2501_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1114
DNA (1113bp) protein (371aa)
Twin-arginine translocation pathway signal n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q217D5_RHOPB
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABD87501.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_30_10_14_R5_P_scaffold_2501_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1201..2226
DNA (1026bp) protein (342aa)
Inner-membrane translocator n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IWE8_RHOP2
ABC transporter permease {ECO:0000313|EMBL:KIZ40234.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
inner-membrane translocator
SCN18_30_10_14_R5_P_scaffold_2501_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2230..3384
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037E162C
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AJY47241.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_30_10_14_R5_P_scaffold_2501_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3389..4156
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037D7771
branched-chain amino acid ABC transporter substrate-binding protein
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJY47242.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_30_10_14_R5_P_scaffold_2501_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4153..4926
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003691FF9
ABC transporter
ABC transporter {ECO:0000313|EMBL:AJY47243.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
SCN18_30_10_14_R5_P_scaffold_2501_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5040..5840)
DNA (801bp) protein (267aa)
UPI0003CE8416 related cluster n=1 Tax=unknown RepID=UPI0003CE8416
ATPase {ECO:0000313|EMBL:ESY74991.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
ATP12 ATPase
SCN18_30_10_14_R5_P_scaffold_2501_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5881..6072)
DNA (192bp) protein (64aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
Pseudouridine synthase n=1 Tax=Mesorhizobium sp. L2C089B000 RepID=V7H4D2_9RHIZ
RluA family pseudouridine synthase
Displaying 7 items

View Taxonomy