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SCN18_30_10_14_R5_P_scaffold_1274_16

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(11785..12060)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIM6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 91.0
  • Bit_score: 177
  • Evalue 3.10e-42
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXL09651.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 91.0
  • Bit_score: 178
  • Evalue 3.30e-42
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 91.0
  • Bit_score: 177
  • Evalue 8.80e-43

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 276
GCACTGGCCAGCCGTCCGGCCTATATGCTGCTGGACGAGCCCTTTGCGGGCATTGATCCCATAGCGGTGGCCGATATCCAACAGCTTGTGCGCCATCTCACGGCACGCGGCATCGGCGTCCTCATCACCGACCACAATGTGCGCGAAACATTGGGTCTGATCGACCGGGCCTACATCATCCATGCCGGCGAGGTTCTGACGCATGGGCGAGCGGAGGAAGTCGTCGCCAACCCTGACGTGCGCAGGCTTTATCTCGGCGAAGGGTTTACGTTGTAG
PROTEIN sequence
Length: 92
ALASRPAYMLLDEPFAGIDPIAVADIQQLVRHLTARGIGVLITDHNVRETLGLIDRAYIIHAGEVLTHGRAEEVVANPDVRRLYLGEGFTL*