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SCN18_30_10_14_R5_P_scaffold_1274

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_1274_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..683
DNA (681bp) protein (227aa)
Transcriptional regulator, IclR family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIK1_9RHIZ
Transcriptional regulator, IclR family {ECO:0000313|EMBL:CCV16211.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
IclR family transcriptional regulator
SCN18_30_10_14_R5_P_scaffold_1274_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(686..1228)
DNA (543bp) protein (181aa)
UPI0003D057FF related cluster n=1 Tax=unknown RepID=UPI0003D057FF
Acetyltransferase {ECO:0000313|EMBL:ESZ22235.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_1274_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1265..1495)
DNA (231bp) protein (77aa)
Msl3173 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GU3_RHILO
hypothetical protein
Msl3173 protein {ECO:0000313|EMBL:BAB50123.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCN18_30_10_14_R5_P_scaffold_1274_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1617..2072
DNA (456bp) protein (152aa)
UPI0003CFC0C9 related cluster n=1 Tax=unknown RepID=UPI0003CFC0C9
Membrane protein {ECO:0000313|EMBL:ESZ45439.1}; TaxID=1287094 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C565B0.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_1274_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2067..2864)
DNA (798bp) protein (266aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
endonuclease III (EC:4.2.99.18)
UPI0003CF1FC0 related cluster n=1 Tax=unknown RepID=UPI0003CF1FC0
SCN18_30_10_14_R5_P_scaffold_1274_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2887..3381
DNA (495bp) protein (165aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FM14_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX16092.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
integral membrane protein
SCN18_30_10_14_R5_P_scaffold_1274_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3458..4354
DNA (897bp) protein (299aa)
6-O-methylguanine-DNA methyltransferase n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FMK5_9RHIZ
6-O-methylguanine DNA methyltransferase {ECO:0000313|EMBL:EZQ16321.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
methylated-DNA/protein-cysteinemethyltransferase
SCN18_30_10_14_R5_P_scaffold_1274_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4440..5339
DNA (900bp) protein (300aa)
UPI0003CEC203 related cluster n=1 Tax=unknown RepID=UPI0003CEC203
Ribokinase {ECO:0000313|EMBL:ESX48709.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
PfkB domain-containing protein
SCN18_30_10_14_R5_P_scaffold_1274_9
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5341..6801
DNA (1461bp) protein (487aa)
Amidase {ECO:0000313|EMBL:ESY02595.1}; EC=3.5.1.4 {ECO:0000313|EMBL:ESY02595.1};; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
UPI0003CF14BA related cluster n=1 Tax=unknown RepID=UPI0003CF14BA
amidase
SCN18_30_10_14_R5_P_scaffold_1274_10
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6804..7745)
DNA (942bp) protein (314aa)
ribosylpyrimidine nucleosidase (EC:3.2.2.8)
UPI0003CE4A08 related cluster n=1 Tax=unknown RepID=UPI0003CE4A08
Uncharacterized protein {ECO:0000313|EMBL:ESY71170.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCN18_30_10_14_R5_P_scaffold_1274_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7875..8300
DNA (426bp) protein (142aa)
UPI0003CDFDF7 related cluster n=1 Tax=unknown RepID=UPI0003CDFDF7
Heat-shock protein Hsp20 {ECO:0000313|EMBL:EZQ16320.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
heat shock protein Hsp20
SCN18_30_10_14_R5_P_scaffold_1274_12
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8364..8633
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FG02_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV16227.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_1274_13
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8714..9178)
DNA (465bp) protein (155aa)
nitrogen regulatory protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379493B
Nitrogen regulatory protein {ECO:0000313|EMBL:EXL09648.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
SCN18_30_10_14_R5_P_scaffold_1274_14
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9249..9800)
DNA (552bp) protein (184aa)
Sigma-54 modulation protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98GS6_RHILO
ribosomal subunit interface protein
Uncharacterized protein {ECO:0000313|EMBL:ESY99330.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCN18_30_10_14_R5_P_scaffold_1274_15
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10080..11603)
DNA (1524bp) protein (508aa)
UPI0003CF687F related cluster n=1 Tax=unknown RepID=UPI0003CF687F
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1287233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
RNA polymerase sigma-54 subunit RpoN
SCN18_30_10_14_R5_P_scaffold_1274_16
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11785..12060)
DNA (276bp) protein (92aa)
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIM6_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXL09651.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
ABC transporter
Displaying 16 items

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