ggKbase home page

SCN18_30_10_14_R5_P_scaffold_2297_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 5877..6137

Top 3 Functional Annotations

Value Algorithm Source
fdhA3; formate dehydrogenase subunit alpha FdhA (EC:1.2.1.2) similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 86.0
  • Bit_score: 156
  • Evalue 3.40e-36
Molybdopterin oxidoreductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA05_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 86.0
  • Bit_score: 162
  • Evalue 9.70e-38
Putative formate dehydrogenase {ECO:0000313|EMBL:CEG07761.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 86.0
  • Bit_score: 162
  • Evalue 1.40e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 261
ATGGGCAGGCAGTCAAATCAGAACTATACTCGACTGACCGAGCCGCTTGTCCGCGACAACGGTGTCCTACGGCCTGCTTCTTGGGACGAGGCCCTTGATCGCGCTGCTGAGGGCTTCCTGCGCAATCGCGAGCTTCATGGCCCCGACGCGTTCGGTATGTTCTCGTGTTCCCGTGCGACCAACGAGATGAATTTCATTGCCCAGAAGTTCGCTCGGGCCGTGATCGGCACCAACAACATCGATTCCTGTAACCGAACTTGA
PROTEIN sequence
Length: 87
MGRQSNQNYTRLTEPLVRDNGVLRPASWDEALDRAAEGFLRNRELHGPDAFGMFSCSRATNEMNFIAQKFARAVIGTNNIDSCNRT*