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SCN18_30_10_14_R5_P_scaffold_2297

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_2297_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1352)
DNA (1350bp) protein (450aa)
Selenocysteine-specific elongation factor SelB n=2 Tax=Oligotropha carboxidovorans RepID=B6JC82_OLICO
selB2; selenocysteine-specific elongation factor SelB
Selenocysteine-specific elongation factor SelB {ECO:0000313|EMBL:AEI07496.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCN18_30_10_14_R5_P_scaffold_2297_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1458..2894)
DNA (1437bp) protein (479aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
selA; L-seryl-tRNA selenium transferase SelA (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YXY5_9RHIZ
SCN18_30_10_14_R5_P_scaffold_2297_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3086..4165)
DNA (1080bp) protein (360aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
selD; selenophosphate synthase SelD (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2W8_9BRAD
SCN18_30_10_14_R5_P_scaffold_2297_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4275..5366)
DNA (1092bp) protein (364aa)
Transglutaminase-like enzyme n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HRB9_AZOC5
transglutaminase
Transglutaminase-like enzyme {ECO:0000313|EMBL:BAF87160.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCN18_30_10_14_R5_P_scaffold_2297_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5877..6137
DNA (261bp) protein (87aa)
fdhA3; formate dehydrogenase subunit alpha FdhA (EC:1.2.1.2)
Molybdopterin oxidoreductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA05_9BRAD
Putative formate dehydrogenase {ECO:0000313|EMBL:CEG07761.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCN18_30_10_14_R5_P_scaffold_2297_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6162..6623
DNA (462bp) protein (154aa)
formate dehydrogenase subunit alpha (EC:1.2.1.2)
Molybdopterin oxidoreductase n=1 Tax=Afipia sp. 1NLS2 RepID=D6VA06_9BRAD
Formate dehydrogenase H {ECO:0000313|EMBL:CEG07760.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
Displaying 6 items

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