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SCN18_30_10_14_R5_P_scaffold_1839_15

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 7519..8358

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 280.0
  • Bit_score: 531
  • Evalue 6.20e-148
DNA-directed RNA polymerase subunit alpha n=4 Tax=Mesorhizobium RepID=V7G205_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 280.0
  • Bit_score: 530
  • Evalue 9.90e-148
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 280.0
  • Bit_score: 529
  • Evalue 3.60e-148

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
ATGATCCAGAAAAACTGGCAGGAACTGATCAAGCCGAACAAGGTCGAGTTCTCGTCGAAGAAAAAGACTTTGACCACTCTGGTCGCCGAGCCACTCGAGCGTGGCTTTGGCCTCACCCTCGGCAACGCGCTGCGTCGCGTGCTTTTGTCGTCGCTGCGTGGCGCTGCCGTAACGGCCGTCCAGATCGACGGCGTTTTGCATGAGTTCTCCTCGATTGGCGGTGTCCGCGAGGACGTGACCGACATCGTGCTCAACATCAAGGAAATCGCCATCAAGATGGAAGGCGATGGCCCCAAGCGCATGGTTGTGCGCAAGCAGGGTCCAGGCGCCGTTCTCGCCGGCGACATCCAGACGGTTGGCGACGTCGAGATCCTCAATCCCGAGCACGTCATCTGCACGCTGGACGAAGGCGCTGAAATCCGCATGGAATTCACCGTCGACACAGGCAAGGGCTACGTGCCGGCAGAGCGCAACCGCGCCGAAGACGCGCCGATCGGGCTCATCCCGGTCGACAGCCTCTACTCGCCGGTCAAGAAGGTCTCCTACAAGGTCGAGAACACCCGCGAGGGCCAGGTTCTCGACTACGACAAGCTGACAATGACCATCGAGACCGACGGTTCCGTCACCGGCGAGGACGCAGTGGCATTCGCCGCCCGCATCCTGCAGGACCAGCTGGCGCTGTTCGTCAACTTCGACGAGCCGCAGAAGGAAGTCGCGACCGAGGCGGTCACCGAGCTTGCCTTCAACCCGGCCCTGCTCAAGAAGGTCGACGAACTGGAGCGTTCCGTCCGTTCGGCCAACTGCCTGAAGAACGACAACAGCGTCTACATTGGCGACCTG
PROTEIN sequence
Length: 280
MIQKNWQELIKPNKVEFSSKKKTLTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSIGGVREDVTDIVLNIKEIAIKMEGDGPKRMVVRKQGPGAVLAGDIQTVGDVEILNPEHVICTLDEGAEIRMEFTVDTGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLTMTIETDGSVTGEDAVAFAARILQDQLALFVNFDEPQKEVATEAVTELAFNPALLKKVDELERSVRSANCLKNDNSVYIGDL