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SCN18_30_10_14_R5_P_scaffold_1839

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_1839_1
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..538
DNA (537bp) protein (179aa)
SCN18_30_10_14_R5_P_scaffold_1839_2
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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531..1103
DNA (573bp) protein (191aa)
50S ribosomal protein L5 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=RL5_RHILO
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCN18_30_10_14_R5_P_scaffold_1839_3
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1131..1436
DNA (306bp) protein (102aa)
UPI0003CFD56C related cluster n=1 Tax=unknown RepID=UPI0003CFD56C
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
rpsN; 30S ribosomal protein S14
SCN18_30_10_14_R5_P_scaffold_1839_4
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1449..1847
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TMD8_MESCW
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
SCN18_30_10_14_R5_P_scaffold_1839_5
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1888..2421
DNA (534bp) protein (178aa)
PREDICTED: 50S ribosomal protein L6, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11566
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;"
50S ribosomal protein L6
SCN18_30_10_14_R5_P_scaffold_1839_6
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2514..2873
DNA (360bp) protein (120aa)
PREDICTED: 50S ribosomal protein L18, cyanelle-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14CB4
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
ribosomal protein L18, bacterial type
SCN18_30_10_14_R5_P_scaffold_1839_7
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2953..3522
DNA (570bp) protein (190aa)
PREDICTED: 30S ribosomal protein S5, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C10EF3
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
30S ribosomal protein S5
SCN18_30_10_14_R5_P_scaffold_1839_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3548..3745
DNA (198bp) protein (66aa)
50S ribosomal protein L30 n=1 Tax=Hoeflea sp. 108 RepID=UPI00036EFA8E
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
50S ribosomal protein L30
SCN18_30_10_14_R5_P_scaffold_1839_9
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3768..4241
DNA (474bp) protein (158aa)
UPI0003CE2103 related cluster n=1 Tax=unknown RepID=UPI0003CE2103
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
rplO; 50S ribosomal protein L15
SCN18_30_10_14_R5_P_scaffold_1839_10
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4370..5710
DNA (1341bp) protein (447aa)
preprotein translocase subunit SecY n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D4AA83
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
preprotein translocase subunit SecY
SCN18_30_10_14_R5_P_scaffold_1839_11
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5707..5991
DNA (285bp) protein (95aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
UPI0003D03AC4 related cluster n=1 Tax=unknown RepID=UPI0003D03AC4
adenylate kinase
SCN18_30_10_14_R5_P_scaffold_1839_12
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6001..6294
DNA (294bp) protein (98aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
adk; adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=KAD_MESSB
SCN18_30_10_14_R5_P_scaffold_1839_13
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6505..6873
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Hoeflea sp. 108 RepID=UPI00035EB225
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
30S ribosomal protein S13
SCN18_30_10_14_R5_P_scaffold_1839_14
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7029..7418
DNA (390bp) protein (130aa)
PREDICTED: 30S ribosomal protein S11, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14663
30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
SCN18_30_10_14_R5_P_scaffold_1839_15
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7519..8358
DNA (840bp) protein (280aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
DNA-directed RNA polymerase subunit alpha n=4 Tax=Mesorhizobium RepID=V7G205_9RHIZ
DNA-directed RNA polymerase subunit alpha
Displaying 15 items

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