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SCN18_30_10_14_R5_P_scaffold_1839_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 2514..2873

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: 50S ribosomal protein L18, cyanelle-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C14CB4 similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 119.0
  • Bit_score: 202
  • Evalue 1.50e-49
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 119.0
  • Bit_score: 198
  • Evalue 3.10e-48
ribosomal protein L18, bacterial type similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 119.0
  • Bit_score: 194
  • Evalue 1.20e-47

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCTTTGAAAGAATCTATCCAGCGCCGCTCTGCGCGTATCCGTCGGCATCTGAAGGCGGTTTCCAACGGCAGGCCGCGTCTTTCGGTGCATCGCACCTCGAAGAACATCTACGTCCAGATCATCGACGACGCCAAGGGTCACACCATCGCGGCCGCTTCGACGCTGGAGAAGGATTTCCGCGACGCCAAGAAGACCGGTGCCGACACAGCAGCGGCAGCGGCAGTTGGCAAGCTGATTGCGGACCGCGCCAAGAAGGCCGGCGTCAAGCAGGTCGTTTTCGATCGTGGTTCATACATCTACCACGGCCGCGTCAAGGCTCTTGCCGAGGCGGCGCGTGAGGGTGGCCTCGAATTCTGA
PROTEIN sequence
Length: 120
MALKESIQRRSARIRRHLKAVSNGRPRLSVHRTSKNIYVQIIDDAKGHTIAAASTLEKDFRDAKKTGADTAAAAAVGKLIADRAKKAGVKQVVFDRGSYIYHGRVKALAEAAREGGLEF*