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SCN18_30_10_14_R5_P_scaffold_1839_5

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1888..2421

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: 50S ribosomal protein L6, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C11566 similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 177.0
  • Bit_score: 329
  • Evalue 1.60e-87
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1287256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC372A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 177.0
  • Bit_score: 325
  • Evalue 2.50e-86
50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 177.0
  • Bit_score: 322
  • Evalue 4.30e-86

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCTCGTATTGGAAAGAAGCCCGTATCCGTGCCGCAGGGCGTGACCGCTTCGGTCGACGGTCAGACCGTCACGGCCAAGGGTCCGAAAGGTGAACTGAAGTTCGTCGTCAACGACGAGGTTCTGGTCAAGCTGGAGAACGGCGAAATCGCCGTGCAGCCGCGCGACACCTCGAAGGGGGCTCGCTCGAAGTGGGGCATGTCCCGCACGCAGATCGTCAACATCCTGACCGGCGTGAAGGACGGCTTTGAAAAGAAGCTCGAGATCACCGGCGTTGGCTATCGTGCCGCGATGCAGGGCCAGAACCTGCAGCTTGCGCTTGGCTTCAGCCACGATGTGGTATACCAGACGCCGAAAGGCATCACGATCACTGTTCCGAAGCCGACCGAAATCAGCGTGACCGGCATCGACAAGCAGCAGGTCGGCCAGGTTGCGGCAGAGATCCGTGAGTATCGCGGTCCTGAACCTTACAAGGGCAAGGGCGTGCGCTACGCCGGTGAGAAGATCCTCCGCAAGGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRIGKKPVSVPQGVTASVDGQTVTAKGPKGELKFVVNDEVLVKLENGEIAVQPRDTSKGARSKWGMSRTQIVNILTGVKDGFEKKLEITGVGYRAAMQGQNLQLALGFSHDVVYQTPKGITITVPKPTEISVTGIDKQQVGQVAAEIREYRGPEPYKGKGVRYAGEKILRKEGKKK*