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SCN18_30_10_14_R5_P_scaffold_1336_6

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 4297..5091

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFY3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 214.0
  • Bit_score: 143
  • Evalue 1.90e-31
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.3
  • Coverage: 214.0
  • Bit_score: 143
  • Evalue 5.30e-32
XRE family transcriptional regulator {ECO:0000313|EMBL:AHB48854.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.3
  • Coverage: 214.0
  • Bit_score: 143
  • Evalue 2.60e-31

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGGGAAATGTCGACGTTGATCTCATAAGGCGAGCCCGGCAACCGCGCGAAAGCGACCGGGTTGAATTCTGCGCGACCGACGAGGAACCCGCGCTGGCCGAGGTTGCAGAAAGCGATCTGGCATCAATTCCCGATCCGCGTTTCAGCCGCGAGGCCCTTCTTCAGACTGCGATCGGGCGCGCGGTGCGCGATTGGCGCAGGCGCCATGACCTCAATGGGCTCGATCTGGCCAAGGCGGCGGGCATTTCGCTTGGCATGCTGTCGCGCATAGAAAACGGCACTGTCTCGCCGTCGCTAAGTACCCTGCAGTCCATCGGTTCGGCACTGGGTGTCCCCGTCAGCGATCTGATCAGCGGCTACAATGAGCAAAGCCGGGCCGTATTCGTTTCGTCTCACTATGCAAGCTTGAGGGACAGGGTCGCCACCTCGCTTGTTCGGGAGGTCTCCACGTCAACGCCGCTTGCACTGGATGCGCTGGTGATCAGGCTTGAGTCGGAGCATGACGCCAAGCCGATGTTCGAAGAACGGGGCACGTTCTTCGTCTATTGCCTCGGCGGCGAAGCGACCTACCTGCACGCCGCGAAAAAATACCCGATGTCGCCCGGCGACAGCCTGACGTTCGATGCATCCGATGCGCACGGCGTCGTCAAGTGCGCGCGGTACCCGGTCAAGCTGCTGGTCGTGCGCAATCATCCGGCGTCAAAGACGGCGAAGGCGAAGGCCGTGGCAAATGTCAGGCAGGATGCTGAAAAGATTGCCGGTCGCCTCTACAGCGCTTTGCGACCAAGACCCTGA
PROTEIN sequence
Length: 265
MGNVDVDLIRRARQPRESDRVEFCATDEEPALAEVAESDLASIPDPRFSREALLQTAIGRAVRDWRRRHDLNGLDLAKAAGISLGMLSRIENGTVSPSLSTLQSIGSALGVPVSDLISGYNEQSRAVFVSSHYASLRDRVATSLVREVSTSTPLALDALVIRLESEHDAKPMFEERGTFFVYCLGGEATYLHAAKKYPMSPGDSLTFDASDAHGVVKCARYPVKLLVVRNHPASKTAKAKAVANVRQDAEKIAGRLYSALRPRP*