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SCN18_30_10_14_R5_P_scaffold_6583_1

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 2..1540

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 512.0
  • Bit_score: 978
  • Evalue 3.50e-282
DNA-directed RNA polymerase subunit beta n=4 Tax=Mesorhizobium RepID=G6Y9J8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 512.0
  • Bit_score: 978
  • Evalue 2.50e-282
DNA-directed RNA polymerase, beta subunit similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 512.0
  • Bit_score: 974
  • Evalue 6.00e-282

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
TCGGAAGAAGCGCTGAAGAACCTCGACGAAGCCGGCATTGTCTACATCGGTGCGGAAGTGCAGCCGGGCGACATCTTGGTCGGCAAGATCACGCCGAAGGGTGAAAGCCCGATGACGCCGGAAGAAAAGCTTCTGCGCGCCATCTTCGGCGAGAAGGCTTCCGATGTGCGTGACACCTCCATGCGCATGCCTCCGGGCACCTTCGGCACGGTCGTGGAAGTTCGCGTCTTCAACCGCCATGGTGTGGAGAAGGACGAACGCGCCATGGCCATCGAGCGCGAGGAGATCGAGCGCCTGGCCAAGGACCGCGACGACGAGCAGGCCATTTTGGACCGTAACGTCTACTCGCGTCTCTCGGGCATGCTGATCGGCAAGGAAGCGATTGCCGGGCCGAAGGGCTTCAAGAAGGGCACCGCGCTCGCCAAGGAGACGCTGGACGACTATCCGCGTTCGCAGTGGTGGCAGTTTGCCGTGGAGAACGAAAAGCTCCAGAGCGAACTGGAAGCCCTGCGTGGCCAGTACGACGATTCCAAGAAGGCGTTGGAACAGCGCTTCATGGACAAGGTCGAGAAGGTCCAGCGTGGCGACGAAATGCCTCCGGGCGTCATGAAGATGGTCAAGGTCTTTGTTGCCGTGAAGCGCAAGATGCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGTGTCGTGTCGCGTATCGTTCCTGTCGAGGACATGCCGTTCCTCGAGGACGGCACGCATGCCGATATCGTGCTCAATCCGTTGGGCGTGCCGTCGCGCATGAACGTCGGTCAGATCCTGGAAACGCACCTTGGCTGGGCTTGCTCCGGCATGGGCAGGAAGATCGGCGACCTCATCGATGCCTATAAGGCGGGTGGCGATATCAAGCCGCTGCGTCAGACCATCGAGCAGGTCATTCCGGCCAACGACCGTAACGAACCGGTTCGTGAGTATGACGATGAGTCCATCATTCGCCTCGGCGAACAGATGCGGCGCGGCGTCTCCATCGCGACCCCGGTTTTCGACGGCGCGCATGAAGCCAACATCAACGAGATGCTGGAGCAGGCGGGTCTTCACACGTCCGGCCAGTCGCAGCTCTATGATGGGCGTACCGGTGAGCCTTTCGACCGCAAGGTGACGATGGGCTACATCTACATGCTCAAGCTTCACCACCTCGTGGACGACAAGATCCACGCGCGTTCGATCGGTCCTTACTCGCTGGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGTGGTCAGCGCTTCGGCGAAATGGAGGTCTGGGCTCTCGAGGCTTACGGCGCCGCCTACACGCTGCAGGAAATGCTGACCGTGAAGTCGGACGACGTGGCCGGCCGTACCAAAGTCTACGAAGCCATCGTCCGCGGCGACGATACCTTCGAGGCTGGTATTCCGGAGAGCTTCAACGTTCTGGTCAAGGAAATGCGGTCGCTCGGACTTAACGTCGAGCTTGAAAACACCAAGCTTGAAGACCAGCCGACGCCACTGCGCGACGCTGCCGAGTAA
PROTEIN sequence
Length: 513
SEEALKNLDEAGIVYIGAEVQPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIEREEIERLAKDRDDEQAILDRNVYSRLSGMLIGKEAIAGPKGFKKGTALAKETLDDYPRSQWWQFAVENEKLQSELEALRGQYDDSKKALEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKRKMQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGWACSGMGRKIGDLIDAYKAGGDIKPLRQTIEQVIPANDRNEPVREYDDESIIRLGEQMRRGVSIATPVFDGAHEANINEMLEQAGLHTSGQSQLYDGRTGEPFDRKVTMGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENTKLEDQPTPLRDAAE*