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SCN18_30_10_14_R5_P_scaffold_6583_2

Organism: SCN18_30_10_14_R5_P_SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14_61_9

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 1693..2280

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 398
  • Evalue 4.40e-108
DNA-directed RNA polymerase subunit beta' n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9J7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 196.0
  • Bit_score: 395
  • Evalue 2.00e-107
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 196.0
  • Bit_score: 395
  • Evalue 5.80e-108

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Taxonomy

SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGAACCAAGAGGTCATGAATCTCTTCAACCCGCAGGCGCCGGCGCAGGTGTTCGATTCCATCCGGATTTCGCTCGCCAGCCCGGAAAAGATCCTGTCGTGGTCGTTCGGCGAGATCAAGAAGCCGGAAACAATCAACTACCGTACGTTCAAGCCGGAACGCGACGGTCTGTTCTGCGCGCGCATCTTCGGGCCGATCAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCATGAAGTACAAGGGCGTCATCTGCGAAAAGTGCGGCGTGGAAGTGACGCTGTCGCGCGTTCGCCGCGAGCGCATGGGCCATATCGAACTGGCGGCGCCTGTCGCCCACATCTGGTTCCTGAAGTCGCTGCCTTCGCGCATCGGCACGCTGCTCGACATGACCCTGAAGGACATCGAGCGCGTCCTCTATTTCGAAAACTACATCGTCACCGAGCCGGGCTTGACCGCACTCAAGGAAAACCAGCTTCTCTCCGAAGAAGAGTACATGCTGGCGGTCGACGAGTATGGCGAGGACAGCTTCACCGCCATGATCGGCGCGGAAGCCATCCATGATCTTCTGGCCGGCATGGACCTG
PROTEIN sequence
Length: 196
MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKSLPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKENQLLSEEEYMLAVDEYGEDSFTAMIGAEAIHDLLAGMDL