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scnpilot_cont_500_p_scaffold_398

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_398_1
unknown

Not on your lists

comp(2..367)
DNA (366bp) protein (122aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_398_2
unknown

Not on your lists

comp(393..776)
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_398_3
Trebouxia aggregata, Trebouxia, Microthamniales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists


comp(798..1097)
DNA (300bp) protein (100aa)
Ribosomal protein S14 n=1 Tax=Trebouxia aggregata RepID=G8XP62_9CHLO
Ribosomal protein S14 {ECO:0000313|EMBL:ABX82545.1}; TaxID=160068 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Microthamniales; Trebouxia.;" source="Trebouxia aggregata.;"
30S ribosomal protein S14, putative; K02954 small subunit ribosomal protein S14
scnpilot_cont_500_p_scaffold_398_4
unknown

Not on your lists

comp(1110..1700)
DNA (591bp) protein (197aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_398_5
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1710..2078)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YG79_9DELT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae;
rplN; 50S ribosomal protein L14
scnpilot_cont_500_p_scaffold_398_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2053..2493)
DNA (441bp) protein (147aa)
50S ribosomal protein L16 n=3 Tax=Cycloclasticus RepID=K0C7U5_CYCSP
rplP; 50S ribosomal protein L16 Tax=RBG_16_Gamma2_60_9_curated
rplP; 50S ribosomal protein L16
scnpilot_cont_500_p_scaffold_398_7
Didymium iridis, Didymium, Physariida, Myxogastromycetidae, Eukaryota

Not on your lists


comp(2501..4261)
DNA (1761bp) protein (587aa)
Ribosomal protein S3 n=1 Tax=Didymium iridis RepID=D3X9X1_9MYCE
Ribosomal protein S3 {ECO:0000313|EMBL:ADD25161.1}; TaxID=5793 species="Eukaryota; Amoebozoa; Mycetozoa; Myxogastria; Myxogastromycetidae; Physariida; Didymiaceae; Didymium.;" source="Didymium iridis.
30S ribosomal protein S3
scnpilot_cont_500_p_scaffold_398_8
Candidatus Carsonella ruddii, Candidatus Carsonella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4266..4523)
DNA (258bp) protein (86aa)
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1202537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Zymobacter group; Candidatus Carso
scnpilot_cont_500_p_scaffold_398_9
Reclinomonas americana, Reclinomonas, Eukaryota

Not on your lists


comp(4545..5312)
DNA (768bp) protein (256aa)
60S ribosomal protein L2, mitochondrial n=1 Tax=Reclinomonas americana RepID=RM02_RECAM
60S ribosomal protein L2, mitochondrial; TaxID=48483 species="Eukaryota; Jakobida; Histionidae; Reclinomonas.;" source="Reclinomonas americana.;"
rplB; 50S ribosomal protein L2
scnpilot_cont_500_p_scaffold_398_10
R_OP11_Levybacteria_36_8b, Levybacteria, Microgenomates, Bacteria

Not on your lists


comp(5326..7038)
DNA (1713bp) protein (571aa)
30S ribosomal protein S7 n=1 Tax=Mycoplasma iowae 695 RepID=G4ENC3_MYCIO
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 Tax=RIFCSPLOWO2_02_FULL_OP11_Levybacteria_36_8b_curated
scnpilot_cont_500_p_scaffold_398_11
Rhodosporidium toruloides, Rhodosporidium, Sporidiobolales, Microbotryomycetes, Basidiomycota, Fungi

Not on your lists


comp(7079..7468)
DNA (390bp) protein (130aa)
30S ribosomal protein s12 n=1 Tax=Rhodosporidium toruloides (strain NP11) RepID=M7XQ42_RHOT1
30S ribosomal protein s12 {ECO:0000313|EMBL:EMS22318.1}; TaxID=1130832 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Microbotryomycetes; Sporidiobolales; Rhodosporidium.;" sourc
30S ribosomal protein S12
scnpilot_cont_500_p_scaffold_398_12
unknown

Not on your lists

comp(7455..7970)
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_398_13
Aquifex aeolicus, Aquifex, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists


comp(7974..8402)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Aquifex aeolicus (strain VF5) RepID=RL11_AQUAE
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=224324 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex.;" source="Aquifex aeolicus (strain VF5).;"
scnpilot_cont_500_p_scaffold_398_14
Vermamoeba vermiformis, Vermamoeba, Eukaryota

Not on your lists

comp(8412..9563)
DNA (1152bp) protein (384aa)
Cytochrome b n=1 Tax=Reclinomonas americana RepID=O21291_RECAM rbh
Cytochrome b {ECO:0000256|RuleBase:RU000300}; TaxID=5778 species="Eukaryota; Amoebozoa; Tubulinea; Euamoebida; Tubulinida; Hartmannellidae; Vermamoeba.;" source="Vermamoeba vermiformis (Amoeba) (Hartm
cytochrome B
scnpilot_cont_500_p_scaffold_398_15
Malawimonas sp. strain 249, Malawimonas, Eukaryota

Not on your lists

comp(10088..10351)
DNA (264bp) protein (88aa)
ATP synthase subunit 9, mitochondrial n=5 Tax=Bangiaceae RepID=I0B6X6_PYRHA
ATP synthase subunit 9, mitochondrial {ECO:0000256|RuleBase:RU003575}; TaxID=1603548 species="Eukaryota; Malawimonadidae; Malawimonas.;" source="Malawimonas sp. strain 249.;"
ATP synthase subunit C family protein
scnpilot_cont_500_p_scaffold_398_16
Peptoniphilus sp. BV3AC2, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10436..10681
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=2 Tax=Peptoniphilus RepID=E0NMR8_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1111133 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. BV3AC2
scnpilot_cont_500_p_scaffold_398_17
unknown

Not on your lists

10674..10904
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_398_18
Helicosporidium sp. ex Simulium jonesi, Helicosporidium, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists


comp(10990..12975)
DNA (1986bp) protein (662aa)
Ribosomal protein S4 {ECO:0000313|EMBL:ACT36188.1}; TaxID=145475 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Helicosporidium.;" source="Helicosporidium sp. subsp. S
scnpilot_cont_500_p_scaffold_398_19
unknown

Not on your lists

comp(13175..14236)
DNA (1062bp) protein (354aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_398_20
Roya obtusa, Roya, Zygnematales, Zygnemophyceae, Streptophyta, Viridiplantae

Not on your lists

comp(14265..16043)
DNA (1779bp) protein (593aa)
NADH dehydrogenase subunit 2 n=1 Tax=Roya obtusa RepID=U5YEE5_9VIRI
NADH dehydrogenase subunit 2 {ECO:0000313|EMBL:AGZ90373.1}; TaxID=104537 species="Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae; Zygnematales; Mesotaeniaceae; Roya.;" source="Roya obtusa.;"
nuoN; NADH-ubiquinone oxidoreductase chain N
scnpilot_cont_500_p_scaffold_398_21
Malawimonas californiana, Malawimonas, Eukaryota

Not on your lists

comp(16044..17795)
DNA (1752bp) protein (584aa)
NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};; TaxID=221722 species="Eukaryota; Malawimonadidae; Malawimonas.;" source="Malawimona
NADH dehydrogenase subunit 4 n=1 Tax=Roya obtusa RepID=U5YGV7_9VIRI
proton-translocating NADH-quinone oxidoreductase subunit M
scnpilot_cont_500_p_scaffold_398_22
Reclinomonas americana, Reclinomonas, Eukaryota

Not on your lists

comp(17945..19819)
DNA (1875bp) protein (625aa)
NADH-ubiquinone oxidoreductase chain 5 {ECO:0000256|RuleBase:RU003404, ECO:0000256|SAAS:SAAS00061106}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003404, ECO:0000256|SAAS:SAAS00061108};; TaxID=1295594 species
NADH dehydrogenase subunit L (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Reclinomonas americana ATCC 50283 RepID=M4QAH2_RECAM
scnpilot_cont_500_p_scaffold_398_23
Chlorella variabilis, Chlorella, Chlorellales, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(19833..20144)
DNA (312bp) protein (104aa)
nuoK; NADH-quinone oxidoreductase subunit K (EC:1.6.99.5)
NADH dehydrogenase subunit 4L n=1 Tax=Chlorella sp. ArM0029B RepID=U5U5M9_9CHLO
NADH dehydrogenase subunit 4L {ECO:0000313|EMBL:AIU38973.1}; TaxID=554065 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Chlorella.;" source="Chlorella
scnpilot_cont_500_p_scaffold_398_24
Chlorokybus atmophyticus, Chlorokybus, Chlorokybales, Chlorokybophyceae, Streptophyta, Viridiplantae

Not on your lists

comp(20261..21142)
DNA (882bp) protein (294aa)
cytochrome-c oxidase (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 n=1 Tax=Chlorokybus atmophyticus RepID=A6YEA4_CHLAT
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU000457}; TaxID=3144 species="Eukaryota; Viridiplantae; Streptophyta; Chlorokybophyceae; Chlorokybales; Chlorokybaceae; Chlorokybus.;" source="Chl
scnpilot_cont_500_p_scaffold_398_25
Thecamonas trahens, Thecamonas, Eukaryota

Not on your lists

comp(21178..21783)
DNA (606bp) protein (202aa)
NADH-ubiquinone oxidoreductase chain 6 {ECO:0000256|RuleBase:RU004430}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU004430};; TaxID=529818 species="Eukaryota; Apusozoa; Apusomonadidae; Thecamonas.;" source="Th
NADH-ubiquinone oxidoreductase chain 6 n=1 Tax=Andalucia godoyi RepID=M4QCS5_9EUKA
nuoJ; NADH dehydrogenase subunit J
scnpilot_cont_500_p_scaffold_398_26
Ixodes ricinus, Ixodes, Ixodida, Acari, Arthropoda, Metazoa

Not on your lists

comp(24599..25204)
DNA (606bp) protein (202aa)
Putative conserved plasma membrane protein (Fragment) n=1 Tax=Ixodes ricinus RepID=V5HZF5_IXORI
Putative conserved plasma membrane protein {ECO:0000313|EMBL:JAB84314.1}; Flags: Fragment;; TaxID=34613 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiforme
scnpilot_cont_500_p_scaffold_398_27
Histiona aroides, Histiona, Eukaryota

Not on your lists

comp(25221..26087)
DNA (867bp) protein (289aa)
Cytochrome c oxidase subunit 3 n=1 Tax=Histiona aroides RepID=M4QCX3_9EUKA
Cytochrome c oxidase subunit 3 {ECO:0000256|RuleBase:RU003375}; TaxID=392300 species="Eukaryota; Jakobida; Histionidae; Histiona.;" source="Histiona aroides (Flagellate).;"
cytochrome c oxidase subunit III
scnpilot_cont_500_p_scaffold_398_28
Trebouxiophyceae sp. MX-AZ01, Trebouxiophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(26117..27727)
DNA (1611bp) protein (537aa)
Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};; Flags: Fragment;; TaxID=1208065 species="Eukaryota; Viridiplantae; Chlorophyta; Trebouxioph
ctaD; Cytochrome c oxidase subunit 1 (EC:1.9.3.1)
Cytochrome c oxidase subunit 1 (Fragment) n=1 Tax=Trebouxiophyceae sp. MX-AZ01 RepID=J7KEH1_9CHLO rbh
Top hits to oomycetes Rose Kantor (4/2/15)
scnpilot_cont_500_p_scaffold_398_29
unknown

Not on your lists

comp(30552..30983)
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_398_30
Seculamonas ecuadoriensis, Seculamonas, Eukaryota

Not on your lists

comp(31106..32107)
DNA (1002bp) protein (334aa)
NADH-ubiquinone oxidoreductase chain 1 {ECO:0000256|RuleBase:RU000473}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU000473};; TaxID=221724 species="Eukaryota; Jakobida; Seculamonas.;" source="Seculamonas ecuad
NADH-ubiquinone oxidoreductase chain 1 n=1 Tax=Seculamonas ecuadoriensis RepID=M4QB19_9EUKA rbh
nuoH; NADH dehydrogenase subunit G
Displaying items 1-30 of 42 in total

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