ggKbase home page

scnpilot_cont_500_p_scaffold_1467

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1467_1
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

82..300
DNA (219bp) protein (73aa)
ATP synthase subunit 9, mitochondrial n=1 Tax=Naegleria gruberi RepID=Q9G8N4_NAEGR
ATP synthase subunit 9, mitochondrial {ECO:0000256|RuleBase:RU003575}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
atpE1; ATP synthase, F0 sector subunit C
scnpilot_cont_500_p_scaffold_1467_2
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

388..849
DNA (462bp) protein (154aa)
Orf145 n=1 Tax=Naegleria gruberi RepID=Q9G8R2_NAEGR
Orf145 {ECO:0000313|EMBL:AAG17792.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
scnpilot_cont_500_p_scaffold_1467_3
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

901..1230
DNA (330bp) protein (110aa)
ATP synthase F0 subunit 8 {ECO:0000313|EMBL:AAG17795.1}; EC=3.6.1.34 {ECO:0000313|EMBL:AAG17795.1};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="
ATP synthase F0 subunit 8 n=1 Tax=Naegleria gruberi RepID=Q9G8Q9_NAEGR
scnpilot_cont_500_p_scaffold_1467_4
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists


1243..1893
DNA (651bp) protein (217aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1609970 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Candidatus Magnetoovum chiem
scnpilot_cont_500_p_scaffold_1467_5
Stachyamoeba lipophora, Stachyamoeba, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

2057..2644
DNA (588bp) protein (196aa)
NADH dehydrogenase subunit 8 {ECO:0000313|EMBL:AJF22922.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AJF22922.1};; TaxID=463046 species="Eukaryota; Heterolobosea; Schizopyrenida; Gruberellidae; Stachyamoeba.;" so
NADH-ubiquinone oxidoreductase subunit I (EC:1.6.5.3)
NADH dehydrogenase subunit 8 n=1 Tax=Naegleria gruberi RepID=Q9G8R6_NAEGR
scnpilot_cont_500_p_scaffold_1467_6
Naegleria fowleri, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

2795..4699
DNA (1905bp) protein (635aa)
Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};; TaxID=5763 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;"
Cytochrome c oxidase subunit 1 n=1 Tax=Naegleria fowleri RepID=M4H5I2_NAEFO rbh
cytochrome C oxidase subunit I
scnpilot_cont_500_p_scaffold_1467_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5400..6191
DNA (792bp) protein (264aa)
50S ribosomal protein L2 n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AEL2_AZOBR
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum
scnpilot_cont_500_p_scaffold_1467_8
Candidatus Sulcia muelleri, Candidatus Sulcia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


6203..6469
DNA (267bp) protein (89aa)
30S ribosomal protein S19 n=1 Tax=Candidatus Sulcia muelleri str. Sulcia-ALF RepID=S5SQU9_9FLAO
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=336810 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Candidatus Sulcia.;" source="Candidatus Sulcia muelleri.;"
scnpilot_cont_500_p_scaffold_1467_9
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists


6473..8371
DNA (1899bp) protein (633aa)
Ribosomal protein S3 n=1 Tax=Naegleria gruberi RepID=Q9G8Q4_NAEGR
Ribosomal protein S3 {ECO:0000313|EMBL:AAG17800.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
scnpilot_cont_500_p_scaffold_1467_10
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists


8455..8874
DNA (420bp) protein (140aa)
Ribosomal protein L16 n=1 Tax=Naegleria gruberi RepID=Q9G8Q3_NAEGR
Ribosomal protein L16 {ECO:0000313|EMBL:AAG17801.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
50S ribosomal protein L16
scnpilot_cont_500_p_scaffold_1467_11
Naegleria fowleri, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists


8871..9236
DNA (366bp) protein (122aa)
Ribosomal protein L14 n=1 Tax=Naegleria fowleri RepID=M4H668_NAEFO
Ribosomal protein L14 {ECO:0000313|EMBL:AFP72318.1}; TaxID=5763 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria fowleri (Brain eating amoeba).;"
rplN; 50S ribosomal protein L14
scnpilot_cont_500_p_scaffold_1467_12
unknown

Not on your lists

9238..9789
DNA (552bp) protein (184aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1467_13
Araucaria cunninghamii, Araucaria, Araucariales, Pinidae, Streptophyta, Viridiplantae

Not on your lists


9796..10104
DNA (309bp) protein (103aa)
Ribosomal protein S14 n=1 Tax=Mesostigma viride RepID=G8DKE5_MESVI
Uncharacterized protein {ECO:0000313|EMBL:JAG97701.1}; TaxID=56994 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Araucariales; Araucariaceae; Arau
rpsN; 30S ribosomal protein S14
scnpilot_cont_500_p_scaffold_1467_14
unknown

Not on your lists

10156..10533
DNA (378bp) protein (126aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1467_15
Stachyamoeba lipophora, Stachyamoeba, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists


10534..11109
DNA (576bp) protein (192aa)
Ribosomal protein L6 n=1 Tax=Polysphondylium pallidum RepID=Q5ILK3_POLPA
Ribosomal protein L6 {ECO:0000313|EMBL:AJF22921.1}; TaxID=463046 species="Eukaryota; Heterolobosea; Schizopyrenida; Gruberellidae; Stachyamoeba.;" source="Stachyamoeba lipophora.;"
scnpilot_cont_500_p_scaffold_1467_16
unknown

Not on your lists

11193..11705
DNA (513bp) protein (171aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1467_17
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists


11706..12086
DNA (381bp) protein (127aa)
Ribosomal protein S12 n=1 Tax=Naegleria gruberi RepID=Q9G8S2_NAEGR
Ribosomal protein S12 {ECO:0000313|EMBL:AAG17782.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
rpsL; 30S ribosomal protein S12
scnpilot_cont_500_p_scaffold_1467_18
Callorhinchus milii, Callorhinchus, Chimaeriformes, Holocephali, Chordata, Metazoa

Not on your lists


12498..12998
DNA (501bp) protein (167aa)
Ribosomal protein L11 n=1 Tax=Naegleria gruberi RepID=Q9G8Q7_NAEGR
39S ribosomal protein L11, mitochondrial-like protein {ECO:0000313|EMBL:AFP08812.1}; TaxID=7868 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes
rplK; 50S ribosomal protein L11
scnpilot_cont_500_p_scaffold_1467_19
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

13035..13943
DNA (909bp) protein (303aa)
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=5762 species="Eukaryota; Heterolobosea; Schi
Succinate:cytochrome c oxidoreductase subunit 2 n=1 Tax=Naegleria gruberi RepID=Q9G8R9_NAEGR rbh
succinate dehydrogenase iron-sulfur protein
scnpilot_cont_500_p_scaffold_1467_20
Stachyamoeba lipophora, Stachyamoeba, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

13973..14521
DNA (549bp) protein (183aa)
NADH dehydrogenase subunit 9 {ECO:0000313|EMBL:AJF22919.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AJF22919.1};; TaxID=463046 species="Eukaryota; Heterolobosea; Schizopyrenida; Gruberellidae; Stachyamoeba.;" so
NADH dehydrogenase subunit 9 n=1 Tax=Phytophthora gallica RepID=K9LYQ8_9STRA
nuoC; NADH-ubiquinone oxidoreductase chain C
scnpilot_cont_500_p_scaffold_1467_21
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

14643..16112
DNA (1470bp) protein (490aa)
NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegl
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Naegleria gruberi RepID=Q9G8P5_NAEGR rbh
nuoM; NADH-quinone oxidoreductase, subunit M
scnpilot_cont_500_p_scaffold_1467_22
unknown

Not on your lists

16214..16426
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1467_23
Naegleria fowleri, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

Not on your lists

16626..18110
DNA (1485bp) protein (495aa)
NADH-ubiquinone oxidoreductase subunit N (EC:1.6.5.3)
NADH dehydrogenase subunit 2 n=1 Tax=Naegleria fowleri RepID=M4H747_NAEFO rbh
NADH dehydrogenase subunit 2 {ECO:0000313|EMBL:AFP72327.1}; TaxID=5763 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria fowleri (Brain eating amoeba).;
scnpilot_cont_500_p_scaffold_1467_24
unknown

Not on your lists

18214..18912
DNA (699bp) protein (233aa)

This feature has no annotations

Displaying 24 items

View Taxonomy