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scnpilot_expt_750_p_scaffold_3038

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_3038_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..315
DNA (315bp) protein (105aa)
Heavy metal efflux pump CusB n=2 Tax=Oligotropha carboxidovorans RepID=F8BQZ0_OLICM
Cation transporter {ECO:0000313|EMBL:KIZ44790.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palust
cusA; heavy metal efflux pump CusB
scnpilot_expt_750_p_scaffold_3038_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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463..855
DNA (393bp) protein (131aa)
Cation efflux system protein CusA n=3 Tax=Oligotropha carboxidovorans RepID=B6JKC8_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIZ44789.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
hypothetical protein
scnpilot_expt_750_p_scaffold_3038_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1278..2423
DNA (1146bp) protein (382aa)
Acyltransferase n=2 Tax=Oligotropha carboxidovorans RepID=F8BQY5_OLICM rbh
Acyltransferase {ECO:0000313|EMBL:KIZ44810.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris
acyltransferase
scnpilot_expt_750_p_scaffold_3038_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2456..2929)
DNA (474bp) protein (158aa)
Putative metal-binding protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BJG1_OLICM
Metal-binding protein {ECO:0000313|EMBL:KIZ44788.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas pal
putative metal-binding protein
scnpilot_expt_750_p_scaffold_3038_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2978..3913)
DNA (936bp) protein (312aa)
Putative copper resistance protein D n=2 Tax=Oligotropha carboxidovorans RepID=F8BJG0_OLICM rbh
Copper resistance protein CopD {ECO:0000313|EMBL:KIZ44787.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudo
putative copper resistance protein D
scnpilot_expt_750_p_scaffold_3038_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3913..4278)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NLH5_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:KIZ44786.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas p
copper resistance protein C
scnpilot_expt_750_p_scaffold_3038_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4309..6177)
DNA (1869bp) protein (623aa)
Multicopper oxidase n=2 Tax=Oligotropha carboxidovorans RepID=B6JJX9_OLICO rbh
Multicopper oxidase {ECO:0000313|EMBL:KIZ44785.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palus
multicopper oxidase
scnpilot_expt_750_p_scaffold_3038_8
unknown

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comp(6189..6329)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_3038_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6326..7531)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4N3_9BRAD
Membrane protein {ECO:0000313|EMBL:KIZ44784.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustri
putative transmembrane protein
scnpilot_expt_750_p_scaffold_3038_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7543..8520)
DNA (978bp) protein (326aa)
Methyltransferase FkbM family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4N4_9BRAD
Methyltransferase {ECO:0000313|EMBL:KIZ44783.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustr
putative methyltransferase
scnpilot_expt_750_p_scaffold_3038_11
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8590..8895)
DNA (306bp) protein (102aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4N5_9BRAD
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFI52915.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipi
RND family efflux transporter MFP subunit
scnpilot_expt_750_p_scaffold_3038_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8908..9381)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4N6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI52916.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
Displaying 12 items

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