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scnpilot_expt_750_bf_scaffold_1740

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_bf_scaffold_1740_1
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..499
DNA (498bp) protein (166aa)
NgoMIV n=3 Tax=Bacteria RepID=M1RSY4_PSEAI
Type II DNA restriction endonuclease {ECO:0000313|EMBL:AJW29850.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro
type II DNA restriction endonuclease R.NGOI
scnpilot_expt_750_bf_scaffold_1740_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

496..669
DNA (174bp) protein (58aa)
TNCP26 n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3F4_PSEAI
TNCP26 {ECO:0000313|EMBL:AAP22633.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
scnpilot_expt_750_bf_scaffold_1740_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

666..872
DNA (207bp) protein (69aa)
Tox1 n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3F5_PSEAI
Tox1 {ECO:0000313|EMBL:AGG19214.1}; Uncharacterized protein {ECO:0000313|EMBL:AAP22632.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomo
hypothetical protein
scnpilot_expt_750_bf_scaffold_1740_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(935..1273)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3F6_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AGG19213.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
hypothetical protein
scnpilot_expt_750_bf_scaffold_1740_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1369..2274)
DNA (906bp) protein (302aa)
DegP n=1 Tax=Pseudomonas aeruginosa RepID=M1S0Z9_PSEAI rbh
DegP {ECO:0000313|EMBL:AGG19212.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
trypsin domain-containing protein
scnpilot_expt_750_bf_scaffold_1740_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2271..2492)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=M1RSX9_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AGG19211.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginos
scnpilot_expt_750_bf_scaffold_1740_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2565..2954)
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=Proteobacteria RepID=T2K1B7_ACHDE
Uncharacterized protein {ECO:0000313|EMBL:AKH45407.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi
scnpilot_expt_750_bf_scaffold_1740_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3040..6390)
DNA (3351bp) protein (1117aa)
TraA n=1 Tax=Pseudomonas aeruginosa RepID=M1RFK1_PSEAI rbh
TraA {ECO:0000313|EMBL:AGG19209.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Ti-type conjugative transfer relaxase TraA
scnpilot_expt_750_bf_scaffold_1740_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6584..6835
DNA (252bp) protein (84aa)
TraC n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3G1_PSEAI
TraC {ECO:0000313|EMBL:AKH45405.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 1
Hypothetical protein
scnpilot_expt_750_bf_scaffold_1740_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6858..7079
DNA (222bp) protein (74aa)
TraD n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3G2_PSEAI
TraD {ECO:0000313|EMBL:AKH45404.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 1
scnpilot_expt_750_bf_scaffold_1740_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7111..8286
DNA (1176bp) protein (392aa)
TraG n=1 Tax=Pseudomonas aeruginosa RepID=Q6X3G3_PSEAI rbh
TraG {ECO:0000313|EMBL:AKH45403.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 1
scnpilot_expt_750_bf_scaffold_1740_12
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8283..9314
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3ASD4_PSEAI
Conjugal transfer protein TraG {ECO:0000313|EMBL:AJW29859.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
conjugal transfer protein TraG
scnpilot_expt_750_bf_scaffold_1740_13
unknown

Not on your lists

comp(9290..9505)
DNA (216bp) protein (72aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1740_14
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9522..9914
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XMU8_9XANT
Uncharacterized protein {ECO:0000313|EMBL:AJW29860.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp.
scnpilot_expt_750_bf_scaffold_1740_15
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10086..10997)
DNA (912bp) protein (304aa)
KfrA protein n=1 Tax=Pseudomonas aeruginosa RepID=A7MAI0_PSEAI rbh
KfrA protein {ECO:0000313|EMBL:AJW29861.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. LM16.;"
kfrA; transcriptional regulator KfrA
scnpilot_expt_750_bf_scaffold_1740_16
unknown

Not on your lists

11033..11584
DNA (552bp) protein (184aa)

This feature has no annotations

scnpilot_expt_750_bf_scaffold_1740_17
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11925..13043)
DNA (1119bp) protein (373aa)
Plasmid replication initiator protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3BDU0_PSEAI rbh
Replication initiation protein {ECO:0000313|EMBL:AJW29843.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
repA-like protein
scnpilot_expt_750_bf_scaffold_1740_18
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13097..13321)
DNA (225bp) protein (75aa)
Plasmid stabilization protein n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3BDD9_PSEAI
Partitioning protein B {ECO:0000313|EMBL:AJW29844.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. L
parB; hypothetical protein
scnpilot_expt_750_bf_scaffold_1740_19
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13342..13974)
DNA (633bp) protein (211aa)
ParA protein n=1 Tax=Serratia marcescens RepID=Q8VW79_SERMA rbh
Partitioning protein A {ECO:0000313|EMBL:AJW29845.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. L
Putative plasmid partitioning protein
scnpilot_expt_750_bf_scaffold_1740_20
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14056..14349)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa HB13 RepID=U1F7H2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AJW29846.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp.
scnpilot_expt_750_bf_scaffold_1740_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14346..15011)
DNA (666bp) protein (222aa)
Resolvase n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3A891_PSEAI
Res {ECO:0000313|EMBL:AKH45416.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15
hypothetical protein
scnpilot_expt_750_bf_scaffold_1740_22
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15404..16360
DNA (957bp) protein (319aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
DNA-cytosine methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WDM7_ACISJ
scnpilot_expt_750_bf_scaffold_1740_23
Achromobacter sp. LM16, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16360..16800
DNA (441bp) protein (147aa)
Putative type II DNA restriction endonuclease n=1 Tax=Paracoccus aestuarii RepID=H9BQT4_9RHOB
Type II DNA restriction endonuclease {ECO:0000313|EMBL:AJW29850.1}; TaxID=1449778 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achro
type II DNA restriction endonuclease R.NGOI
Displaying 23 items

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