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SCNpilot_BF_INOC_scaffold_444

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_BF_INOC_scaffold_444_1
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206..511
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B4U5_METEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF08203.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibact
SCNpilot_BF_INOC_scaffold_444_2
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

529..1089
DNA (561bp) protein (187aa)
Conjugal transfer protein F n=1 Tax=Limnobacter sp. MED105 RepID=A6GUS9_9BURK
Conjugal transfer protein F {ECO:0000313|EMBL:EDM82079.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp.
conjugative transfer signal peptidase TraF
SCNpilot_BF_INOC_scaffold_444_3
unknown

Not on your lists

1095..1349
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_444_4
unknown

Not on your lists

1346..1534
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_444_5
unknown

Not on your lists

1531..1809
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_444_6
unknown

Not on your lists

1793..1987
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_444_7
unknown

Not on your lists

2050..2352
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_444_8
unknown

Not on your lists

2362..2649
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_444_9
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2649..3173
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00037C5A43
phospholipid/glycerol acyltransferase
Phospholipid/glycerol acyltransferase {ECO:0000313|EMBL:BAP88373.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
SCNpilot_BF_INOC_scaffold_444_10
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3263..5737
DNA (2475bp) protein (825aa)
Conjugal transfer protein TraG n=1 Tax=Limnobacter sp. MED105 RepID=A6GUT0_9BURK
Conjugal transfer protein TraG {ECO:0000313|EMBL:EDM82080.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter
TRAG family protein
SCNpilot_BF_INOC_scaffold_444_11
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5745..7811
DNA (2067bp) protein (689aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=391597 species="Bacteria; Proteobac
DNA topoisomerase n=1 Tax=Limnobacter sp. MED105 RepID=A6GUS8_9BURK
traE; Prokaryotic type I DNA topoisomerase
SCNpilot_BF_INOC_scaffold_444_12
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7814..8989
DNA (1176bp) protein (392aa)
TraB n=1 Tax=Limnobacter sp. MED105 RepID=A6GUS7_9BURK
TraB {ECO:0000313|EMBL:EDM82077.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
conjugal transfer protein TraB
SCNpilot_BF_INOC_scaffold_444_13
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9037..9420
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZII8_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ14406.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
SCNpilot_BF_INOC_scaffold_444_14
unknown

Not on your lists

9470..9976
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_444_15
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9987..10277
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KFE53316.1}; TaxID=317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas syringae.
SCNpilot_BF_INOC_scaffold_444_16
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10452..11183)
DNA (732bp) protein (244aa)
Putative Lytic transglycosylase-like, catalytic n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2J9A4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KHD17790.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacch
lytic transglycosylase, catalytic
SCNpilot_BF_INOC_scaffold_444_17
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11193..11522)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GUS5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDM82075.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED
SCNpilot_BF_INOC_scaffold_444_18
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11461..11880)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GUS4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDM82074.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED
SCNpilot_BF_INOC_scaffold_444_19
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11877..13370)
DNA (1494bp) protein (498aa)
Conjugation TrbI family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GUS3_9BURK
Conjugation TrbI family protein {ECO:0000313|EMBL:EDM82073.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter
Type IV secretion system protein virB10
SCNpilot_BF_INOC_scaffold_444_20
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13385..14617)
DNA (1233bp) protein (411aa)
Mating pair formation protein TrbG n=1 Tax=Limnobacter sp. MED105 RepID=A6GUS2_9BURK
Mating pair formation protein TrbG {ECO:0000313|EMBL:EDM82072.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobac
conjugal transfer protein TrbG
SCNpilot_BF_INOC_scaffold_444_21
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14654..15418)
DNA (765bp) protein (255aa)
Conjugal transfer protein F n=1 Tax=Limnobacter sp. MED105 RepID=A6GUS1_9BURK
Conjugal transfer protein F {ECO:0000313|EMBL:EDM82071.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp.
Conjugal transfer protein
SCNpilot_BF_INOC_scaffold_444_22
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15436..17262)
DNA (1827bp) protein (609aa)
TrbL protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GUS0_9BURK
TrbL protein {ECO:0000313|EMBL:EDM82070.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
TrbL/VirB6 plasmid conjugal transfer protein
SCNpilot_BF_INOC_scaffold_444_23
unknown

Not on your lists

comp(17241..17525)
DNA (285bp) protein (95aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_444_24
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17638..18381)
DNA (744bp) protein (248aa)
Conjugal transfer protein TrbJ n=1 Tax=Limnobacter sp. MED105 RepID=A6GUR8_9BURK
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:EDM82068.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter
conjugal transfer protein TrbJ
SCNpilot_BF_INOC_scaffold_444_25
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18378..20876)
DNA (2499bp) protein (833aa)
CagE, TrbE, VirB component of type IV transporter system, conserved region n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2K0_THIK1
Type IV secretory pathway, VirB4 component (CagE, TrbE, VirB ) {ECO:0000313|EMBL:CDW96092.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="
type IV transporter system protein VirB
SCNpilot_BF_INOC_scaffold_444_26
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20890..21201)
DNA (312bp) protein (104aa)
Conjugal transfer protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GUR5_9BURK
Conjugal transfer protein {ECO:0000313|EMBL:EDM82104.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. M
hypothetical protein
SCNpilot_BF_INOC_scaffold_444_27
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21220..21576)
DNA (357bp) protein (119aa)
Conjugal transfer protein TrbC n=1 Tax=Limnobacter sp. MED105 RepID=A6GUR4_9BURK
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EDM82103.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter
conjugal transfer protein TrbC
SCNpilot_BF_INOC_scaffold_444_28
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21663..22649)
DNA (987bp) protein (329aa)
Probable conjugal transfer protein TrbB n=1 Tax=Limnobacter sp. MED105 RepID=A6GUR3_9BURK
Probable conjugal transfer protein TrbB {ECO:0000313|EMBL:EDM82102.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Lim
P-type conjugative transfer ATPase TrbB
SCNpilot_BF_INOC_scaffold_444_29
unknown

Not on your lists

comp(22649..22993)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_BF_INOC_scaffold_444_30
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23008..23463)
DNA (456bp) protein (152aa)
Single-stranded DNA-binding protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GUR1_9BURK
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiacea
single-strand binding protein
Displaying items 1-30 of 52 in total

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