ggKbase home page

SCNpilot_cont_1000_bf_scaffold_969_9

Organism: scnpilot_dereplicated_Plasmid_Rhizobiales_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 11309..11998

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein trbF n=1 Tax=Azospirillum amazonense Y2 RepID=G1XXZ7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 229.0
  • Bit_score: 440
  • Evalue 1.10e-120
Conjugal transfer protein trbF {ECO:0000313|EMBL:EGY01849.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 229.0
  • Bit_score: 440
  • Evalue 1.50e-120
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 229.0
  • Bit_score: 438
  • Evalue 1.30e-120
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrospirillum amazonense → Nitrospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGCGATCTTCCGCCGCGCATCGGTCCGCTATGGCCGCACACCTGAACCGGAAACCCCGTATCAGCGCGCCGCGCAGGCTTGGGACGAGCGCATCGGCTCCGCGCGGGTGCAGGCCAAGAACTGGCGGCTAATGGCCTTCGGCTCGCTCGCGCTCTCCATGGGCCTGGCCGGCGGCCTTGTCTGGCAATCGACCCACGGCAGCATCGTCCCTTGGGTGGTGCAGGTCGACAAGCTCGGCCAGGCTCAGGCCGTGGCGGCCGCCACGGCCGATTACACGCCGAGCGATCCGCAGATCGCCTGGTATCTCGCCCACTTCGTCTCGCTGGTTCGCTCGCTGCCGGCCGACCCCATCATCGTGCGGCAGAACTGGCTCGACGCTTACGACTTCACCAGCACCTCCGGGTCCCAGGCGCTCAACGACTATGCCCGCGCCAACGACCCGTTCGCCAAGCTCGGCAAGCAGCAGATCGCCATCGATGTCTCAAGCGTGATCCGTGCGTCGCCGTCGAGCTTCCGCGTCGAATGGGTGGAGCACCGCTATCAGGACGGTGCGCTCGCCGATACCTCGCGCTGGACCGCGATCCTCACCGTCGCGATCCAGACGCCAACCTCCGCCGACGTGCTCCGCAAGAACCCGCTCGGCATCTACGTCACCGCAATCAACTGGTCGAAGGAGCTGGGACAATGA
PROTEIN sequence
Length: 230
MAIFRRASVRYGRTPEPETPYQRAAQAWDERIGSARVQAKNWRLMAFGSLALSMGLAGGLVWQSTHGSIVPWVVQVDKLGQAQAVAAATADYTPSDPQIAWYLAHFVSLVRSLPADPIIVRQNWLDAYDFTSTSGSQALNDYARANDPFAKLGKQQIAIDVSSVIRASPSSFRVEWVEHRYQDGALADTSRWTAILTVAIQTPTSADVLRKNPLGIYVTAINWSKELGQ*