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SCNpilot_cont_1000_bf_scaffold_969

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_969_1
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

597..2336
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHR0_GLUDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACI52538.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_1000_bf_scaffold_969_2
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2378..4360
DNA (1983bp) protein (661aa)
Conjugal transfer protein traG n=1 Tax=Azospirillum amazonense Y2 RepID=G1XXY2_9PROT rbh
Conjugal transfer protein traG {ECO:0000313|EMBL:EGY01876.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 rbh
SCNpilot_cont_1000_bf_scaffold_969_3
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4368..4814
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHS3_GLUDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI52551.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_1000_bf_scaffold_969_4
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5065..6432
DNA (1368bp) protein (456aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHS8_GLUDA rbh
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11 rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:ACI52556.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_1000_bf_scaffold_969_5
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6440..8878
DNA (2439bp) protein (813aa)
AAA ATPase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT1_GLUDA rbh
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4 rbh
AAA ATPase {ECO:0000313|EMBL:ACI52559.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_1000_bf_scaffold_969_6
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8875..9612
DNA (738bp) protein (246aa)
P-type conjugative transfer protein TrbJ n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT2_GLUDA rbh
conjugal transfer protein TrbJ rbh
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:ACI52560.1}; Flags: Precursor;; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_1000_bf_scaffold_969_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9622..9948
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V0W9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS30463.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_969_8
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9945..11306
DNA (1362bp) protein (454aa)
P-type conjugative transfer protein TrbL n=2 Tax=Afipia RepID=K8NPW3_AFIFE rbh
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:EKS30464.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL rbh
SCNpilot_cont_1000_bf_scaffold_969_9
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11309..11998
DNA (690bp) protein (230aa)
Conjugal transfer protein trbF n=1 Tax=Azospirillum amazonense Y2 RepID=G1XXZ7_9PROT
Conjugal transfer protein trbF {ECO:0000313|EMBL:EGY01849.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 rbh
SCNpilot_cont_1000_bf_scaffold_969_10
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11995..13068
DNA (1074bp) protein (358aa)
P-type conjugative transfer protein TrbG n=2 Tax=Afipia RepID=D6V0W5_9BRAD rbh
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EFI53345.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
SCNpilot_cont_1000_bf_scaffold_969_11
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13065..14273
DNA (1209bp) protein (403aa)
Conjugation TrbI family protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT7_GLUDA
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
Conjugation TrbI family protein {ECO:0000313|EMBL:ACI52565.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCNpilot_cont_1000_bf_scaffold_969_12
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14270..14530
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI000375AF7D
Uncharacterized protein {ECO:0000313|EMBL:ETR77818.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_969_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14494..15429)
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family n=2 Tax=Afipia RepID=D6V0W2_9BRAD rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFI53342.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_969_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15565..15846)
DNA (282bp) protein (94aa)
Mercuric transport protein periplasmic component n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ6_NITHX
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
mercuric transport protein periplasmic protein; K08364 periplasmic mercuric ion binding protein
SCNpilot_cont_1000_bf_scaffold_969_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16262..16957)
DNA (696bp) protein (232aa)
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ4_NITHX
cytochrome c biogenesis protein, transmembrane region
Cytochrome c biogenesis protein, transmembrane region {ECO:0000313|EMBL:ABE65003.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_969_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16957..17217)
DNA (261bp) protein (87aa)
Thioredoxin/glutaredoxin n=3 Tax=Oligotropha carboxidovorans RepID=F8BR05_OLICM
Redox-active disulfide protein 1 {ECO:0000313|EMBL:CEG10187.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
thioredoxin/glutaredoxin
SCNpilot_cont_1000_bf_scaffold_969_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17221..17640)
DNA (420bp) protein (140aa)
Transcriptional regulator, MerR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ2_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig140, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53547.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
MerR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_969_18
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17759..18976)
DNA (1218bp) protein (406aa)
MFS transporter n=2 Tax=Oligotropha carboxidovorans RepID=F8BR07_OLICM
L-galactonate transporter {ECO:0000313|EMBL:CEG10189.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
major facilitator superfamily protein
SCNpilot_cont_1000_bf_scaffold_969_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19015..21468)
DNA (2454bp) protein (818aa)
Heavy metal translocating P-type ATPase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFJ0_NITHX rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ABE65007.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
heavy metal translocating P-type ATPase rbh
SCNpilot_cont_1000_bf_scaffold_969_20
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21560..22063)
DNA (504bp) protein (168aa)
MerR family transcriptional regulator n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J2L6_ACIMA
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:BAJ81960.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_1000_bf_scaffold_969_21
Pseudoalteromonas rubra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22186..22401)
DNA (216bp) protein (72aa)
hcnC; hydrogen cyanide synthase HcnC; K10816 hydrogen cyanide synthase HcnC [EC:1.4.99.5]
Hydrogen cyanide synthase HcnC n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1KEK6_9GAMM
Hydrogen cyanide synthase HcnC {ECO:0000313|EMBL:ERG45294.1}; TaxID=1117318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas rubra ATCC 29570.;"
SCNpilot_cont_1000_bf_scaffold_969_22
unknown

Not on your lists

22561..23193
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_969_23
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23606..25039)
DNA (1434bp) protein (478aa)
Mercuric reductase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B9H0_9RHIZ
mercuric reductase
Mercuric reductase {ECO:0000313|EMBL:AGK57181.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_1000_bf_scaffold_969_24
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25036..25293)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0BAM4_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK57180.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_1000_bf_scaffold_969_25
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25325..25633)
DNA (309bp) protein (103aa)
Putative mercuric transport protein, periplasmic n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B130_9RHIZ
putative mercuric transport protein, periplasmic
Putative mercuric transport protein, periplasmic {ECO:0000313|EMBL:AGK57179.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_1000_bf_scaffold_969_26
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25704..26120)
DNA (417bp) protein (139aa)
Mercuric transport protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B2I9_9RHIZ
mercuric transport protein
Mercuric transport protein {ECO:0000313|EMBL:AGK57178.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_1000_bf_scaffold_969_27
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26205..26633
DNA (429bp) protein (143aa)
MerR family transcriptional regulator n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B4M3_9RHIZ
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AGK57177.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
SCNpilot_cont_1000_bf_scaffold_969_28
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26784..26984)
DNA (201bp) protein (67aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Afipia sp. 1NLS2 RepID=D6V504_9BRAD
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:EFI53034.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_1000_bf_scaffold_969_29
bacterium YEK0313, Bacteria

Not on your lists

27092..27343
DNA (252bp) protein (84aa)
Transposase n=1 Tax=Rhizobium sp. Pop5 RepID=K0VG87_9RHIZ
Integrase core domain protein {ECO:0000313|EMBL:CEJ14700.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
yagA1; hypothetical protein
SCNpilot_cont_1000_bf_scaffold_969_trna_1
unknown

Not on your lists

comp(27384..27464)
DNA (81bp)
transferRNA
Displaying items 1-30 of 31 in total

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