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SCNpilot_cont_1000_bf_scaffold_969_13

Organism: scnpilot_dereplicated_Plasmid_Rhizobiales_2

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(14494..15429)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=2 Tax=Afipia RepID=D6V0W2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 305.0
  • Bit_score: 485
  • Evalue 4.10e-134
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EFI53342.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 305.0
  • Bit_score: 485
  • Evalue 5.70e-134
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 300.0
  • Bit_score: 433
  • Evalue 7.50e-119
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
GTGAGGCTGAATTTCGAGATGCGCATCGAGCTGCAAGATTTGAGGTGGGCCATCGTCGCAGCTCAATATCGGAGCCTGCGGCAAGGGGCGGAAGCGCTCAATGTCCGGCAATCTACGCTCAGCCGTCGCTTGCGCAGCCTGGAATACAAGCTTGAGGTCCAGCTCTTCGAACGCACCAACGGCGGTACCCGGCCAACGATTGAAGGCTTGGAATTCCTGGACGCCGCACGCCGAATCATCGACGAAACGGAAACGATCGCCGCTCGCCTCAAGACCCGTTCCCGGGGCGAGAGTGGACGGTTGACGATCGGCGTGCATGCATCGCTCTCAGCCGGCAATCTCCGGGCCACGCTGATAGAGTATCGCAGGCGCTTTCCGGATGTGGACACACACTTGGTCGATGGATCAAGCGGCCACTTGATCTCCGATCTTTCGAGCTTTGCCATAGACATCGCATTTGTCGCCGAAGGAAATCCCCGATGGGATGGAAAGTCGCTGCCCGTTTGGAGCGAGCGGGCTGTCGTTGCTATTCCGGAAGGCCACCCGCTGAGCGATCGTGACACGATTCCTTGGGCTGACTTGAAGTCTGAATCGCTACTGTTACCGCAGCGTGGGCCTGGCCCCGAATTTCTGAAACTAATTGCGAGCAAGCTCGGGGATCATGATCAGGCAAAACTGATCCGTCATGACGTCGCGCTCGACCGGCTTCTTACCCTTGTCGGGGCCGGTTGGGGCATTTTGCTCGCGTTAGAGGGGGCGACGGGCGTGGCCTATCCAGGTGTCATATTCCGCGAAGTTCATGACAACGACGGACCGACGCGCGTGAACTTTCGGGCTTTTTGGCGGCAGACAAACTGCAATCCCTCTCTGCGTCCGTTTCTCGATATGCTTCGCGAGCGCTACCCCGATCTTTCAGCCGATCCAGTGCCGGGCTGA
PROTEIN sequence
Length: 312
VRLNFEMRIELQDLRWAIVAAQYRSLRQGAEALNVRQSTLSRRLRSLEYKLEVQLFERTNGGTRPTIEGLEFLDAARRIIDETETIAARLKTRSRGESGRLTIGVHASLSAGNLRATLIEYRRRFPDVDTHLVDGSSGHLISDLSSFAIDIAFVAEGNPRWDGKSLPVWSERAVVAIPEGHPLSDRDTIPWADLKSESLLLPQRGPGPEFLKLIASKLGDHDQAKLIRHDVALDRLLTLVGAGWGILLALEGATGVAYPGVIFREVHDNDGPTRVNFRAFWRQTNCNPSLRPFLDMLRERYPDLSADPVPG*