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scnpilot_expt_750_p_scaffold_888_curated

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_888_curated_1
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47..3064)
DNA (3018bp) protein (1006aa)
Helicase domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8V0_SPHTD
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:KIN88283.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
helicase domain-containing protein
helicase domain-containing protein
scnpilot_expt_750_p_scaffold_888_curated_2
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3405..6809)
DNA (3405bp) protein (1135aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QRD0_METTR
Uncharacterized protein {ECO:0000313|EMBL:KIN88997.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_888_curated_3
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7397..11185)
DNA (3789bp) protein (1263aa)
ATPase (AAA+ superfamily)-like protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8U7_SPHTD
Uncharacterized protein {ECO:0000313|EMBL:KIN88580.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
ATPase (AAA+ superfamily)-like protein
ATPase (AAA+ superfamily)-like protein
scnpilot_expt_750_p_scaffold_888_curated_4
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11247..12185)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7K112_PSEPS
Uncharacterized protein {ECO:0000313|EMBL:KFJ92593.1}; TaxID=633150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_888_curated_5
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12334..14331
DNA (1998bp) protein (666aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00037CA61F
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_888_curated_6
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14341..15537
DNA (1197bp) protein (399aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
RNA-splicing ligase RtcB n=1 Tax=Thauera phenylacetica B4P RepID=N6ZLU2_9RHOO
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_888_curated_7
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15556..16095
DNA (540bp) protein (180aa)
Guanosine polyphosphate pyrophosphohydrolase/synthetase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NE95_9BURK
guanosine polyphosphate pyrophosphohydrolase/synthetase
guanosine polyphosphate pyrophosphohydrolase/synthetase
guanosine polyphosphate pyrophosphohydrolase/synthetase
scnpilot_expt_750_p_scaffold_888_curated_8
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16111..17835
DNA (1725bp) protein (575aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LYD3_SYNAS
Uncharacterized protein {ECO:0000313|EMBL:EXI82571.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
cytoplasmic protein
cytoplasmic protein
scnpilot_expt_750_p_scaffold_888_curated_9
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18083..19180
DNA (1098bp) protein (366aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=A1WBT9_ACISJ
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_888_curated_10
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19177..19779
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2ECI3_9BURK
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_888_curated_11
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19779..22532
DNA (2754bp) protein (918aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZC94_9RHOO
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_888_curated_12
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22529..23398
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0APY9_9RHOO
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_888_curated_13
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23347..23589)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZET1_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:EPZ15885.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_888_curated_14
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23768..24037)
DNA (270bp) protein (90aa)
Tax=BJP_IG2103_Dechloromonas_60_92
scnpilot_expt_750_p_scaffold_888_curated_15
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24042..25475)
DNA (1434bp) protein (478aa)
Transposase IS4 family protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GG09_NITSI
transposase IS4 family protein
transposase IS4 family protein
transposase IS4 family protein
scnpilot_expt_750_p_scaffold_888_curated_16
unknown

Not on your lists

comp(25889..26269)
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_888_curated_17
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26272..26829)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Thauera sp. 27 RepID=N6XHY2_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO79000.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_888_curated_18
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28183..29397
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Thauera sp. 27 RepID=N6XB81_9RHOO
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_888_curated_19
unknown

Not on your lists

29756..29944
DNA (189bp) protein (63aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_888_curated_20
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29986..30933
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE23 RepID=UPI00036537F4
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein
NAD-dependent epimerase/dehydratase family protein
scnpilot_expt_750_p_scaffold_888_curated_21
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30930..33281
DNA (2352bp) protein (784aa)
Glycosyl transferase group 1 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LN28_HALO1
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACY13399.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
group 1 glycosyl transferase
scnpilot_expt_750_p_scaffold_888_curated_22
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33278..34945
DNA (1668bp) protein (556aa)
O-methyltransferase family 2 n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0R6C1_9DELT
O-methyltransferase family 2
O-methyltransferase family 2
O-methyltransferase family 2
scnpilot_expt_750_p_scaffold_888_curated_23
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34942..35649
DNA (708bp) protein (236aa)
Phosphoglycerate mutase n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0R7S6_9DELT
Phosphoglycerate mutase (fragment)
Phosphoglycerate mutase (fragment)
Phosphoglycerate mutase (fragment)
Displaying 23 items

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