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scnpilot_expt_750_p_scaffold_1293_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_1293_curated_1
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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150..1295
DNA (1146bp) protein (382aa)
S-methyl-5-thioribose-1-phosphate isomerase; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
S-methyl-5-thioribose-1-phosphate isomerase; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
S-methyl-5-thioribose-1-phosphate isomerase; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
S-methyl-5-thioribose-1-phosphate isomerase; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
scnpilot_expt_750_p_scaffold_1293_curated_2
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1288..1956
DNA (669bp) protein (223aa)
L-fuculose phosphate aldolase {ECO:0000313|EMBL:EXI90302.1}; EC=4.1.2.17 {ECO:0000313|EMBL:EXI90302.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
class II aldolase/adducin family protein; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17]
class II aldolase/adducin family protein; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17]
class II aldolase/adducin family protein; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17]
scnpilot_expt_750_p_scaffold_1293_curated_3
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2032..2331
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AR37_PSERE
Post-segregation antitoxin (Ccd killing mechanism protein) encoded by the F plasmid {ECO:0000313|EMBL:EXI90366.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_1293_curated_4
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2331..2639
DNA (309bp) protein (103aa)
CcdB-like toxin protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CHB8_9BURK
CcdB-like toxin protein
CcdB-like toxin protein
CcdB-like toxin protein
scnpilot_expt_750_p_scaffold_1293_curated_5
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2690..4303
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K6S5_AZOSB
hypothetical protein; K07137
hypothetical protein; K07137
hypothetical protein; K07137
scnpilot_expt_750_p_scaffold_1293_curated_6
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4308..5363
DNA (1056bp) protein (352aa)
Putative RNA methyltransferase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q233_9RHOO
putative RNA methyltransferase
putative RNA methyltransferase
putative RNA methyltransferase
scnpilot_expt_750_p_scaffold_1293_curated_7
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5379..8066)
DNA (2688bp) protein (896aa)
Magnesium-translocating P-type ATPase n=1 Tax=Azoarcus sp. KH32C RepID=H0PVF7_9RHOO
magnesium-translocating P-type ATPase
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:BAL25305.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
magnesium-translocating P-type ATPase
scnpilot_expt_750_p_scaffold_1293_curated_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8081..8380)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI31_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62187.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_1293_curated_9
unknown

Not on your lists

comp(8585..8713)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1293_curated_10
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9423..10883
DNA (1461bp) protein (487aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
Catalase n=1 Tax=Azoarcus sp. KH32C RepID=H0PX65_9RHOO
catalase
catalase
scnpilot_expt_750_p_scaffold_1293_curated_11
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11143..12057
DNA (915bp) protein (305aa)
Zinc/iron permease n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q0P9_ACIAP
zinc/iron permease; K07238 zinc transporter, ZIP family
zinc/iron permease; K07238 zinc transporter, ZIP family
zinc/iron permease; K07238 zinc transporter, ZIP family
scnpilot_expt_750_p_scaffold_1293_curated_12
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12182..14971)
DNA (2790bp) protein (930aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TFP8_BURSG
outer membrane autotransporter barrel domain-containing protein
outer membrane autotransporter barrel domain-containing protein
outer membrane autotransporter barrel domain-containing protein
scnpilot_expt_750_p_scaffold_1293_curated_13
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15017..16348)
DNA (1332bp) protein (444aa)
Glycosyltransferase n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JU49_BURVG
glycosyltransferase
glycosyltransferase
glycosyltransferase
scnpilot_expt_750_p_scaffold_1293_curated_14
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17272..21057)
DNA (3786bp) protein (1262aa)
Transcriptional activator domain protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IXR1_9GAMM
Transcriptional activator domain protein {ECO:0000313|EMBL:EGW23470.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
guanylate cyclase
guanylate cyclase
scnpilot_expt_750_p_scaffold_1293_curated_15
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21235..22689)
DNA (1455bp) protein (485aa)
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CNL8_VARPS
2-aminoadipate aminotransferase {ECO:0000313|EMBL:KIF83063.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
GntR family transcriptional regulator with aminotransferase domain
GntR family transcriptional regulator with aminotransferase domain
scnpilot_expt_750_p_scaffold_1293_curated_16
unknown

Not on your lists

22867..23217
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_1293_curated_17
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23331..24026)
DNA (696bp) protein (232aa)
Integrin alpha beta-propellor repeat protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UFB1_SINMW
alpha/beta hydrolase domain-containing protein
alpha/beta hydrolase domain-containing protein
alpha/beta hydrolase domain-containing protein
Displaying 17 items

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