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scnpilot_expt_750_p_scaffold_902_curated

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_902_curated_1
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1901
DNA (1899bp) protein (633aa)
chemotaxis protein CheW; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
chemotaxis protein CheW; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
chemotaxis protein CheW; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
chemotaxis protein CheW; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
scnpilot_expt_750_p_scaffold_902_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1947..3569
DNA (1623bp) protein (541aa)
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GY2_DECAR
histidine kinase, HAMP region: chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
histidine kinase, HAMP region: chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
histidine kinase, HAMP region: chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
scnpilot_expt_750_p_scaffold_902_curated_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3581..4141
DNA (561bp) protein (187aa)
CheW-like protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GY1_DECAR
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW
scnpilot_expt_750_p_scaffold_902_curated_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4216..4809
DNA (594bp) protein (198aa)
hypothetical protein; K03411 chemotaxis protein CheD [EC:3.5.1.44]
hypothetical protein; K03411 chemotaxis protein CheD [EC:3.5.1.44]
hypothetical protein; K03411 chemotaxis protein CheD [EC:3.5.1.44]
hypothetical protein; K03411 chemotaxis protein CheD [EC:3.5.1.44]
scnpilot_expt_750_p_scaffold_902_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4809..5618
DNA (810bp) protein (270aa)
chemotaxis protein CheR; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
chemotaxis protein CheR; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
chemotaxis protein CheR; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
chemotaxis protein CheR; K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
scnpilot_expt_750_p_scaffold_902_curated_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5615..6142
DNA (528bp) protein (176aa)
chemotaxis protein; K03411 chemotaxis protein CheD [EC:3.5.1.44]
chemotaxis protein; K03411 chemotaxis protein CheD [EC:3.5.1.44]
chemotaxis protein; K03411 chemotaxis protein CheD [EC:3.5.1.44]
chemotaxis protein; K03411 chemotaxis protein CheD [EC:3.5.1.44]
scnpilot_expt_750_p_scaffold_902_curated_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6135..7247
DNA (1113bp) protein (371aa)
chemotaxis-specific methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
chemotaxis-specific methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
chemotaxis-specific methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
chemotaxis-specific methylesterase (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
scnpilot_expt_750_p_scaffold_902_curated_8
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7408..8274
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037F6BC7
HDOD domain protein {ECO:0000313|EMBL:EXI85005.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
putative signal transduction protein
putative signal transduction protein
scnpilot_expt_750_p_scaffold_902_curated_9
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8303..8875
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHC5_AZOSU
hypothetical protein; K03744 LemA protein
hypothetical protein; K03744 LemA protein
hypothetical protein; K03744 LemA protein
scnpilot_expt_750_p_scaffold_902_curated_10
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8895..9794
DNA (900bp) protein (300aa)
E3 Ubiquitin ligase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHC4_AZOSU
E3 Ubiquitin ligase
E3 Ubiquitin ligase
E3 Ubiquitin ligase
scnpilot_expt_750_p_scaffold_902_curated_11
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9975..11132
DNA (1158bp) protein (386aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHH7_AZOSU
diguanylate cyclase domain-containing protein
diguanylate cyclase domain-containing protein
diguanylate cyclase domain-containing protein
scnpilot_expt_750_p_scaffold_902_curated_12
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11177..12811
DNA (1635bp) protein (545aa)
PAS protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47GB9_DECAR
PAS; K03776 aerotaxis receptor
PAS; K03776 aerotaxis receptor
PAS; K03776 aerotaxis receptor
scnpilot_expt_750_p_scaffold_902_curated_13
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12955..13839
DNA (885bp) protein (295aa)
Patatin n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR55_ACCPU
Patatin; K07001 NTE family protein
Patatin; K07001 NTE family protein
Patatin; K07001 NTE family protein
scnpilot_expt_750_p_scaffold_902_curated_14
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14003..14419)
DNA (417bp) protein (139aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLD4_AZOSU
HIT family hydrolase, diadenosine tetraphosphate hydrolase; K02503 Hit-like protein involved in cell-cycle regulation
HIT family hydrolase, diadenosine tetraphosphate hydrolase; K02503 Hit-like protein involved in cell-cycle regulation
HIT family hydrolase, diadenosine tetraphosphate hydrolase; K02503 Hit-like protein involved in cell-cycle regulation
scnpilot_expt_750_p_scaffold_902_curated_15
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14553..16481)
DNA (1929bp) protein (643aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037F1328
ABC transporter ATP-binding protein uup {ECO:0000313|EMBL:EXI81721.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup
ABC transporter; K15738 ATP-binding cassette, subfamily F, uup
scnpilot_expt_750_p_scaffold_902_curated_16
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16488..17057)
DNA (570bp) protein (190aa)
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
scnpilot_expt_750_p_scaffold_902_curated_17
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17151..17366)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TAQ5_BURSG
Uncharacterized protein {ECO:0000313|EMBL:AJC23300.1}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_902_curated_18
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17658..19022
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12D) RepID=C6BIB2_RALP1
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_902_curated_19
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19019..20128
DNA (1110bp) protein (370aa)
Methyltransferase n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PNQ4_9BURK
Methyltransferase {ECO:0000313|EMBL:AHB04611.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
methyltransferase
methyltransferase
scnpilot_expt_750_p_scaffold_902_curated_20
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20175..22214)
DNA (2040bp) protein (680aa)
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47HT8_DECAR
histidine kinase, HAMP region: chemotaxis sensory transducer
histidine kinase, HAMP region: chemotaxis sensory transducer
histidine kinase, HAMP region: chemotaxis sensory transducer
scnpilot_expt_750_p_scaffold_902_curated_21
Pectobacterium carotovorum, Pectobacterium, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22731..23984
DNA (1254bp) protein (418aa)
Prophage P4 integrase n=1 Tax=Pectobacterium sp. (strain SCC3193) RepID=K4FS72_PECSS
Integrase {ECO:0000313|EMBL:KFF61395.1}; TaxID=180957 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pectobacterium.;" source="Pectobacterium carotovorum subsp. brasiliense.;"
Prophage P4 integrase
Prophage P4 integrase
scnpilot_expt_750_p_scaffold_902_curated_22
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24184..25452
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000379B406
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_902_curated_23
unknown

Not on your lists

26023..26901
DNA (879bp) protein (293aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_902_curated_24
Stenotrophomonas phage S1, Caudovirales, Viruses

Not on your lists

27023..27289
DNA (267bp) protein (89aa)
Gp29 n=1 Tax=Stenotrophomonas phage S1 RepID=B7SYF9_9CAUD
Gp29 {ECO:0000313|EMBL:ACJ24754.1}; TaxID=573591 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Stenotrophomonas phage S1.;"
prophage regulatory protein; K07733 prophage regulatory protein
prophage regulatory protein; K07733 prophage regulatory protein
scnpilot_expt_750_p_scaffold_902_curated_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27286..28047
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FU28_STRMK
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_902_curated_26
Candidatus Regiella insecticola, Candidatus Regiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28104..28475
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE233 RepID=L3IBT0_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EFL91103.1}; TaxID=663321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; aphid secondary symbionts; Candidatus Regiella.;" source="Candidatus Regiella insecticola LSR1.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_902_curated_27
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28493..28864
DNA (372bp) protein (124aa)
Putative Late control gene B protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WDU1_RALSL
Phage transcriptional activator, Ogr/Delta
Phage transcriptional activator, Ogr/Delta
Phage transcriptional activator, Ogr/Delta
scnpilot_expt_750_p_scaffold_902_curated_28
unknown

Not on your lists

comp(28938..29105)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_902_curated_29
Pseudogulbenkiania sp. NH8B, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29250..29429
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IWZ6_PSEUL
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_902_curated_30
unknown

Not on your lists

29426..29821
DNA (396bp) protein (132aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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