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scnpilot_expt_750_p_scaffold_184_curated

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Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_184_curated_1
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..585)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVX2_ACCPU
hypothetical protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
hypothetical protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
hypothetical protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
scnpilot_expt_750_p_scaffold_184_curated_2
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(582..1856)
DNA (1275bp) protein (425aa)
Outer membrane efflux protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DT1_DECAR
Outer membrane efflux protein
Outer membrane efflux protein
Outer membrane efflux protein
scnpilot_expt_750_p_scaffold_184_curated_3
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1918..2259)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DT2_DECAR
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_184_curated_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2278..2718)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DT3_DECAR
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_184_curated_5
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2814..3488)
DNA (675bp) protein (225aa)
Cytochrome c n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNU6_AZOSU
cytochrome C
cytochrome C
cytochrome C
scnpilot_expt_750_p_scaffold_184_curated_6
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3876..4553
DNA (678bp) protein (226aa)
Two component heavy metal response transcriptional regulator n=1 Tax=uncultured bacterium RepID=U6C0F4_9BACT
heavy metal response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
heavy metal response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
heavy metal response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
scnpilot_expt_750_p_scaffold_184_curated_7
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4550..5953
DNA (1404bp) protein (468aa)
heavy metal sensor kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
heavy metal sensor kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
heavy metal sensor kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
Heavy metal sensor kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QNV1_AZOSU
scnpilot_expt_750_p_scaffold_184_curated_8
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5964..7049
DNA (1086bp) protein (362aa)
Putative phage integrate n=1 Tax=uncultured bacterium RepID=U6C3G6_9BACT
site-specific recombinase XerD
site-specific recombinase XerD
site-specific recombinase XerD
scnpilot_expt_750_p_scaffold_184_curated_9
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7229..7501
DNA (273bp) protein (91aa)
Putative regulatory protein ArsR family n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K814_AZOSB
ArsR family transcriptional regulator {ECO:0000313|EMBL:KJV25818.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
arsR; ArsR family regulatory protein
arsR; ArsR family regulatory protein
scnpilot_expt_750_p_scaffold_184_curated_10
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7498..7911
DNA (414bp) protein (138aa)
arsC2; putative arsenate reductase (glutaredoxin) (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1]
arsC2; putative arsenate reductase (glutaredoxin) (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1]
arsC2; putative arsenate reductase (glutaredoxin) (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1]
arsC2; putative arsenate reductase (glutaredoxin) (EC:1.20.4.1); K03741 arsenate reductase [EC:1.20.4.1]
scnpilot_expt_750_p_scaffold_184_curated_11
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7920..8993
DNA (1074bp) protein (358aa)
ArsB, putative arsenical-resistance protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q4L6_9RHOO
arsB; arsB, putative arsenical-resistance protein
arsB; arsB, putative arsenical-resistance protein
arsB; arsB, putative arsenical-resistance protein
scnpilot_expt_750_p_scaffold_184_curated_12
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9004..9369
DNA (366bp) protein (122aa)
Arsenical resistance operon trans-acting repressor ArsD n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=A9AS13_BURM1
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24650.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
arsenical resistance operon trans-acting repressor ArsD
arsenical resistance operon trans-acting repressor ArsD
scnpilot_expt_750_p_scaffold_184_curated_13
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9379..11130
DNA (1752bp) protein (584aa)
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24649.1}; EC=3.6.3.16 {ECO:0000313|EMBL:AJG24649.1};; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
arsenite-activated ATPase ArsA (EC:3.6.3.16); K01551 arsenite-transporting ATPase [EC:3.6.3.16]
arsenite-activated ATPase ArsA (EC:3.6.3.16); K01551 arsenite-transporting ATPase [EC:3.6.3.16]
arsenite-activated ATPase ArsA (EC:3.6.3.16); K01551 arsenite-transporting ATPase [EC:3.6.3.16]
scnpilot_expt_750_p_scaffold_184_curated_14
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11288..12631)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DM31_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU79857.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_184_curated_15
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12664..13626)
DNA (963bp) protein (321aa)
Type II secretory pathway, component ExeA,putative ATPase {ECO:0000313|EMBL:ETY83358.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
scnpilot_expt_750_p_scaffold_184_curated_16
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13680..16475)
DNA (2796bp) protein (932aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D9G0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETY83359.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_184_curated_17
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17062..17985)
DNA (924bp) protein (308aa)
Transcriptional regulator, AraC family n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EU5_DECAR
AraC family transcriptional regulator
AraC family transcriptional regulator
AraC family transcriptional regulator
scnpilot_expt_750_p_scaffold_184_curated_18
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18186..18644
DNA (459bp) protein (153aa)
ferredoxin:(2Fe-2S)-binding; K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16]
ferredoxin:(2Fe-2S)-binding; K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16]
ferredoxin:(2Fe-2S)-binding; K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16]
ferredoxin:(2Fe-2S)-binding; K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16]
scnpilot_expt_750_p_scaffold_184_curated_19
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18654..20849
DNA (2196bp) protein (732aa)
twin-arginine translocation pathway signal; K07303 isoquinoline 1-oxidoreductase, beta subunit [EC:1.3.99.16]
twin-arginine translocation pathway signal; K07303 isoquinoline 1-oxidoreductase, beta subunit [EC:1.3.99.16]
twin-arginine translocation pathway signal; K07303 isoquinoline 1-oxidoreductase, beta subunit [EC:1.3.99.16]
twin-arginine translocation pathway signal; K07303 isoquinoline 1-oxidoreductase, beta subunit [EC:1.3.99.16]
scnpilot_expt_750_p_scaffold_184_curated_20
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20851..21855
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z2E9_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:EEG08752.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
hypothetical protein; K07402 xanthine dehydrogenase accessory factor
hypothetical protein; K07402 xanthine dehydrogenase accessory factor
scnpilot_expt_750_p_scaffold_184_curated_21
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21866..22477
DNA (612bp) protein (204aa)
MobA-like protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
MobA-like protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
MobA-like protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
MobA-like protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
scnpilot_expt_750_p_scaffold_184_curated_22
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22521..22853)
DNA (333bp) protein (111aa)
Uncharacterized protein n=5 Tax=Burkholderia RepID=B1FWA8_9BURK
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_184_curated_23
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22902..23369)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47EA4_DECAR
Uncharacterized protein {ECO:0000313|EMBL:KFB67200.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_184_curated_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23515..24039)
DNA (525bp) protein (175aa)
Heat shock protein Hsp20 n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4N2_NITHN
heat shock protein Hsp20; K13993 HSP20 family protein
heat shock protein Hsp20; K13993 HSP20 family protein
heat shock protein Hsp20; K13993 HSP20 family protein
scnpilot_expt_750_p_scaffold_184_curated_25
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24747..25247
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUJ7_SIDLE
hypothetical protein
hypothetical protein
hypothetical protein
scnpilot_expt_750_p_scaffold_184_curated_26
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25359..25946
DNA (588bp) protein (196aa)
Nitroreductase n=1 Tax=mine drainage metagenome RepID=E6QTV3_9ZZZZ
nitroreductase
nitroreductase
nitroreductase
scnpilot_expt_750_p_scaffold_184_curated_27
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26893..27981
DNA (1089bp) protein (363aa)
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036CF726
transaldolase
transaldolase
scnpilot_expt_750_p_scaffold_184_curated_28
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27985..29703
DNA (1719bp) protein (573aa)
ABC-type uncharacterized transport system, permease and ATPase component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QIK8_AZOSU
ABC transporter permease/ATPase; K02471 putative ATP-binding cassette transporter
ABC transporter permease/ATPase; K02471 putative ATP-binding cassette transporter
ABC transporter permease/ATPase; K02471 putative ATP-binding cassette transporter
scnpilot_expt_750_p_scaffold_184_curated_29
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30031..30345
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T2P3_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER61226.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_expt_750_p_scaffold_184_curated_30
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30433..31311)
DNA (879bp) protein (293aa)
Regulatory protein, LysR:LysR, substrate-binding protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47D52_DECAR
LysR family transcriptional regulator
LysR family transcriptional regulator
LysR family transcriptional regulator
Displaying items 1-30 of 184 in total

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