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SCNpilot_expt_1000_bf_scaffold_1991_curated

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1991_curated_1
unknown

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1991_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

481..1155
DNA (675bp) protein (225aa)
HAD family hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1T8_9BURK
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:AFU45139.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1182..1559
DNA (378bp) protein (126aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZB3_9BURK
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:AFU45140.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1652..2584
DNA (933bp) protein (311aa)
Peptidase S49 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I833_9BURK
peptidase S49
Peptidase S49 {ECO:0000313|EMBL:AFU45141.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2946..3722)
DNA (777bp) protein (259aa)
Uroporphyrin-III C/tetrapyrrole methyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW97_9BURK
uroporphyrin-III C/tetrapyrrole methyltransferase
Uroporphyrin-III C/tetrapyrrole methyltransferase {ECO:0000313|EMBL:AFU45142.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3719..4318)
DNA (600bp) protein (200aa)
Maf-like protein C380_07170 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQ51_9BURK
maf protein
Maf-like protein C380_07170 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4344..4892
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1U3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45144.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5004..5186
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=5 Tax=Acidovorax RepID=F0QCX4_ACIAP
rpmF; 50S ribosomal protein L32
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1991_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5294..6346
DNA (1053bp) protein (351aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" so
Phosphate acyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I835_9BURK
phosphate acyltransferase
SCNpilot_expt_1000_bf_scaffold_1991_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6346..7323
DNA (978bp) protein (326aa)
3-oxoacyl-ACP synthase (EC:2.3.1.180)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWA1_9BURK
SCNpilot_expt_1000_bf_scaffold_1991_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7383..7670
DNA (288bp) protein (96aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQ55_9BURK
malonyl CoA-acyl carrier protein transacylase
SCNpilot_expt_1000_bf_scaffold_1991_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7648..8340
DNA (693bp) protein (231aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQ55_9BURK
malonyl CoA-acyl carrier protein transacylase
SCNpilot_expt_1000_bf_scaffold_1991_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8337..9086
DNA (750bp) protein (250aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1U7_9BURK
3-oxoacyl-(acyl-carrier-protein) reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AFU45149.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9190..9429
DNA (240bp) protein (80aa)
Acyl carrier protein n=18 Tax=Comamonadaceae RepID=ACP_ACIAC
acpP; acyl carrier protein; K02078 acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9478..10740
DNA (1263bp) protein (421aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I838_9BURK
3-oxoacyl-ACP synthase
SCNpilot_expt_1000_bf_scaffold_1991_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11390..12016
DNA (627bp) protein (209aa)
RNA polymerase sigma factor n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQ60_9BURK
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12026..12685
DNA (660bp) protein (220aa)
Anti sigma-E protein RseA n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1U9_9BURK
anti sigma-E protein RseA
Anti sigma-E protein RseA {ECO:0000313|EMBL:AFU45154.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12865..13767
DNA (903bp) protein (301aa)
Sigma E regulatory protein, MucB/RseB n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZC1_9BURK
sigma E regulatory protein MucB/RseB
Sigma E regulatory protein, MucB/RseB {ECO:0000313|EMBL:AFU45155.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13932..15401
DNA (1470bp) protein (490aa)
Protease Do n=1 Tax=Acidovorax sp. KKS102 RepID=K0I841_9BURK
protease Do
Protease Do {ECO:0000313|EMBL:AFU45156.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_20
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16928..17731
DNA (804bp) protein (268aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Elongation factor 4 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWB0_9BURK
GTP-binding protein LepA
SCNpilot_expt_1000_bf_scaffold_1991_curated_21
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17915..18658
DNA (744bp) protein (248aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Signal peptidase I n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQ64_9BURK
signal peptidase I
SCNpilot_expt_1000_bf_scaffold_1991_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18695..19057
DNA (363bp) protein (121aa)
Transmembrane protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1V2_9BURK
transmembrane protein
Transmembrane protein {ECO:0000313|EMBL:AFU45159.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_23
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19058..19741
DNA (684bp) protein (228aa)
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Ribonuclease 3 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZC5_9BURK
SCNpilot_expt_1000_bf_scaffold_1991_curated_24
Neisseria sp. HMSC06F02, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19603..20271)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M5S2_NEISI
Uncharacterized protein {ECO:0000313|EMBL:KJJ22813.1}; TaxID=1581124 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria sp. HMSC06F02.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_25
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20559..20750
DNA (192bp) protein (64aa)
GTPase Era n=1 Tax=Acidovorax sp. KKS102 RepID=K0I845_9BURK
era; GTPase Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_26
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20843..21610
DNA (768bp) protein (256aa)
DNA repair protein RecO n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWB3_9BURK
recO; DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1991_curated_27
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21607..22389
DNA (783bp) protein (261aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQ66_9BURK
pyridoxine 5'-phosphate synthase
SCNpilot_expt_1000_bf_scaffold_1991_curated_28
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22447..22854
DNA (408bp) protein (136aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1V4_9BURK
holo-(acyl-carrier-protein) synthase
SCNpilot_expt_1000_bf_scaffold_1991_curated_29
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22918..24009
DNA (1092bp) protein (364aa)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; N-acetyl-beta-glucosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Glycoside hydrolase family 3 domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZC9_9BURK
glycoside hydrolase
SCNpilot_expt_1000_bf_scaffold_1991_curated_30
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24070..24804)
DNA (735bp) protein (245aa)
Small-conductance mechanosensitive channel-like protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I849_9BURK
small-conductance mechanosensitive channel-like protein
Small-conductance mechanosensitive channel-like protein {ECO:0000313|EMBL:AFU45166.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying items 1-30 of 46 in total

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