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SCNpilot_expt_1000_bf_scaffold_3433_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3433_curated_1
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..149)
DNA (147bp) protein (49aa)
Tricarballylate dehydrogenase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6Y3_9BURK
tricarballylate dehydrogenase
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_3433_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(342..1340)
DNA (999bp) protein (333aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAP8_9BURK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AFU48394.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3433_curated_3
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1463..2290)
DNA (828bp) protein (276aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0TWP8_9BURK
transcriptional regulator, IclR family
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_3433_curated_4
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2395..3426
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0KB81_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_3433_curated_5
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3578..5095
DNA (1518bp) protein (506aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Acidovorax sp. CF316 RepID=J1E7S2_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_expt_1000_bf_scaffold_3433_curated_6
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5113..5907
DNA (795bp) protein (265aa)
citrate synthase; K01647 citrate synthase [EC:2.3.3.1]
Citrate synthase n=1 Tax=Acidovorax sp. CF316 RepID=J0K1Y7_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_3433_curated_7
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5904..6737
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0TWQ4_9BURK
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_3433_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6742..7806)
DNA (1065bp) protein (355aa)
Porin n=1 Tax=Acidovorax sp. KKS102 RepID=K0I590_9BURK
porin
Porin {ECO:0000313|EMBL:AFU48392.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3433_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7895..8893)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IG93_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48391.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3433_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8972..10063)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6X9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48390.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3433_curated_11
unknown

Not on your lists

comp(10600..10998)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3433_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11204..12373
DNA (1170bp) protein (390aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYX1_9BURK
SCNpilot_expt_1000_bf_scaffold_3433_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12510..13223)
DNA (714bp) protein (238aa)
Permease n=1 Tax=Acidovorax sp. KKS102 RepID=K0I585_9BURK
permease
Permease {ECO:0000313|EMBL:AFU48387.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3433_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13327..13902)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IG84_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48386.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3433_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14281..14835)
DNA (555bp) protein (185aa)
Single-stranded DNA-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6X4_9BURK
ssDNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3433_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14962..15543)
DNA (582bp) protein (194aa)
Major facilitator superfamily transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAN8_9BURK
major facilitator superfamily transporter
Major facilitator superfamily transporter {ECO:0000313|EMBL:AFU48384.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3433_curated_17
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15993..16223
DNA (231bp) protein (77aa)
UvrABC system protein A n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IHN8_BORPD
uvrA2; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Displaying 17 items

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