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SCNpilot_expt_1000_bf_scaffold_5378_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5378_curated_1
unknown

Not on your lists

comp(202..312)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5378_curated_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

556..936
DNA (381bp) protein (127aa)
HipA N-terminal domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS29_9BURK
HipA N-terminal domain-containing protein {ECO:0000313|EMBL:EHL24811.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
SCNpilot_expt_1000_bf_scaffold_5378_curated_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2346..2705
DNA (360bp) protein (120aa)
Transcriptional regulator, XRE family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WQA9_COMTE
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EED65080.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
XRE family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5378_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2702..3226
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BTJ0_DELAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34958.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_expt_1000_bf_scaffold_5378_curated_5
unknown

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comp(3207..3629)
DNA (423bp) protein (141aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5378_curated_6
unknown

Not on your lists

3843..4106
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q11ZB8_POLSJ
SCNpilot_expt_1000_bf_scaffold_5378_curated_7
unknown

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comp(4168..4728)
DNA (561bp) protein (187aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5378_curated_8
unknown

Not on your lists

comp(4787..5044)
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5378_curated_9
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5480..7018
DNA (1539bp) protein (513aa)
Integrase catalytic subunit n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS59_9BURK
Transposase {ECO:0000313|EMBL:KEH14946.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
putative transposase
SCNpilot_expt_1000_bf_scaffold_5378_curated_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7033..7701)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9LXW4_PSEAI
Transposase ISSod9 {ECO:0000313|EMBL:KGH06960.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
tnp19; ISSod9, transposase
SCNpilot_expt_1000_bf_scaffold_5378_curated_11
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8268..9854)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9LXW4_PSEAI
Transposase {ECO:0000313|EMBL:EYC52154.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
tnp19; ISSod9, transposase
SCNpilot_expt_1000_bf_scaffold_5378_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11353..11964)
DNA (612bp) protein (204aa)
Phosphatidic acid phosphatase type 2/haloperoxidase family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYG8_9BURK
phosphatidic acid phosphatase type 2/haloperoxidase family protein
Phosphatidic acid phosphatase type 2/haloperoxidase family protein {ECO:0000313|EMBL:AFU44865.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5378_curated_13
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11971..14880)
DNA (2910bp) protein (970aa)
Probable cadmium-transporting ATPase {ECO:0000313|EMBL:CKG94661.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CKG94661.1};; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAZ7_ACIET
SCNpilot_expt_1000_bf_scaffold_5378_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14971..15369
DNA (399bp) protein (133aa)
MerR family transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPC4_9BURK
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AFU44863.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_5378_curated_15
unknown

Not on your lists

comp(16948..17073)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5378_curated_16
unknown

Not on your lists

comp(17416..17553)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5378_curated_17
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17819..17944)
DNA (126bp) protein (42aa)
Cation efflux protein n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=E3HXW8_ACHXA
cation efflux protein
Cation efflux protein {ECO:0000313|EMBL:ADP19922.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_expt_1000_bf_scaffold_5378_curated_18
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18220..18426
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MB02_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM33603.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Displaying 18 items

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