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SCNpilot_expt_1000_bf_scaffold_1335_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1335_curated_1
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(197..343)
DNA (147bp) protein (49aa)
Protein TolA n=1 Tax=Acidovorax sp. NO-1 RepID=H0C192_9BURK
TonB domain-containing protein; K03646 colicin import membrane protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_1335_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1175..1597)
DNA (423bp) protein (141aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICQ6_9BURK
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:AFU47061.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1613..2326)
DNA (714bp) protein (238aa)
Protein TolQ n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3H3_9BURK
protein TolQ
Protein TolQ {ECO:0000313|EMBL:AFU47060.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2323..2766)
DNA (444bp) protein (148aa)
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I777_9BURK
tol-pal system-associated acyl-CoA thioesterase
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:AFU47059.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2763..3947)
DNA (1185bp) protein (395aa)
Aminotransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW15_9BURK
aminotransferase
Aminotransferase {ECO:0000313|EMBL:AFU47058.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4066..4605)
DNA (540bp) protein (180aa)
N utilization substance protein B homolog n=1 Tax=Acidovorax sp. KKS102 RepID=K0I282_9BURK
NusB antitermination factor
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4602..5066)
DNA (465bp) protein (155aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICQ4_9BURK
ribH; 6,7-dimethyl-8-ribityllumazine synthase
SCNpilot_expt_1000_bf_scaffold_1335_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5086..6207)
DNA (1122bp) protein (374aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3G9_9BURK
3,4-dihydroxy-2-butanone 4-phosphate synthase
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:AFU47055.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6591..6887)
DNA (297bp) protein (99aa)
Ferredoxin n=1 Tax=Acidovorax sp. KKS102 RepID=K0I773_9BURK
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AFU47054.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6900..7538)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW12_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47053.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8105..8386)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I279_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47052.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8703..9611
DNA (909bp) protein (303aa)
Short-chain dehydrogenase/reductase sdr n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICQ1_9BURK
short-chain dehydrogenase/reductase sdr
Short-chain dehydrogenase/reductase sdr {ECO:0000313|EMBL:AFU47051.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9683..11209
DNA (1527bp) protein (509aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-Rule:MF_00578}; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_00578}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Glutamate--cysteine ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3G5_9BURK
glutamate--cysteine ligase
SCNpilot_expt_1000_bf_scaffold_1335_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11305..11535)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I769_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47049.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11532..11783)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW08_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47048.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_16
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11876..12847
DNA (972bp) protein (324aa)
Ribosome biogenesis GTPase A n=1 Tax=Acidovorax sp. KKS102 RepID=K0I277_9BURK
GTP-binding protein, HSR1-like protein
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_17
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13058..15334
DNA (2277bp) protein (759aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0ICP8_9BURK
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AFU47046.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15478..15621)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3G3_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU47045.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_1335_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15703..16893)
DNA (1191bp) protein (397aa)
Major facilitator superfamily protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I767_9BURK
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:AFU47044.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 19 items

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