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SCNpilot_expt_1000_bf_scaffold_3612_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3612_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..3352
DNA (3351bp) protein (1117aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:AFU48302.1}; EC=1.2.7.8 {ECO:0000313|EMBL:AFU48302.1};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Indolepyruvate ferredoxin oxidoreductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I513_9BURK
SCNpilot_expt_1000_bf_scaffold_3612_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3716..3988
DNA (273bp) protein (91aa)
Preprotein translocase subunit YajC n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFY8_9BURK
preprotein translocase subunit YajC
Preprotein translocase subunit YajC {ECO:0000313|EMBL:AFU48301.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3612_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4095..5978
DNA (1884bp) protein (628aa)
Protein translocase subunit SecD n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6P8_9BURK
secD; preprotein translocase subunit SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3612_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6071..7021
DNA (951bp) protein (317aa)
Protein-export membrane protein SecF n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAG3_9BURK
secF; preprotein translocase subunit SecF
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3612_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7039..8034
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYQ9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48298.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3612_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7988..9448
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYQ9_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU48298.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3612_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9572..10738)
DNA (1167bp) protein (389aa)
DNA protecting protein DprA n=1 Tax=Acidovorax sp. KKS102 RepID=K0I509_9BURK
DNA protecting protein DprA
DNA protecting protein DprA {ECO:0000313|EMBL:AFU48297.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3612_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10818..11339)
DNA (522bp) protein (174aa)
Peptidoglycan-binding LysM n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFY3_9BURK
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:AFU48296.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3612_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11348..11986)
DNA (639bp) protein (213aa)
Peptidoglycan-binding LysM n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFY3_9BURK
peptidoglycan-binding LysM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:AFU48296.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3612_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12186..12695
DNA (510bp) protein (170aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Peptide deformylase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6P3_9BURK
peptide deformylase
SCNpilot_expt_1000_bf_scaffold_3612_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12695..13201
DNA (507bp) protein (169aa)
Putative lipoprotein transmembrane n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAF9_9BURK
lipoprotein transmembrane
Putative lipoprotein transmembrane {ECO:0000313|EMBL:AFU48294.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3612_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13266..14240
DNA (975bp) protein (325aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Methionyl-tRNA formyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYQ5_9BURK
methionyl-tRNA formyltransferase
SCNpilot_expt_1000_bf_scaffold_3612_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14237..15061
DNA (825bp) protein (275aa)
AzlC family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I503_9BURK
AzlC family protein
AzlC family protein {ECO:0000313|EMBL:AFU48292.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3612_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15058..15396
DNA (339bp) protein (113aa)
Branched-chain amino acid transport n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFY0_9BURK
branched-chain amino acid transporter
Branched-chain amino acid transport {ECO:0000313|EMBL:AFU48291.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3612_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15474..16673
DNA (1200bp) protein (400aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Phosphoglycerate kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6N7_9BURK
phosphoglycerate kinase
SCNpilot_expt_1000_bf_scaffold_3612_curated_16
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16890..17576
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAL5_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER58485.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3612_curated_17
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17573..18043
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUW0_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHL23888.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
Displaying 17 items

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