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SCNpilot_expt_1000_bf_scaffold_3044_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3044_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177..623)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7Y2_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU45061.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3044_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(636..1157)
DNA (522bp) protein (174aa)
GCN5-like N-acetyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW39_9BURK
N-acetyltransferase GCN5
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AFU45062.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3044_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1302..1553
DNA (252bp) protein (84aa)
30S ribosomal protein S16 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPY8_9BURK
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3044_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1628..2200
DNA (573bp) protein (191aa)
Ribosome maturation factor RimM n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1P5_9BURK
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3044_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2230..2988
DNA (759bp) protein (253aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ68_9BURK
trmD; tRNA (guanine-N(1)-)-methyltransferase
SCNpilot_expt_1000_bf_scaffold_3044_curated_6
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3117..3500
DNA (384bp) protein (128aa)
50S ribosomal protein L19 n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7Y5_9BURK
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3044_curated_7
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3672..4316
DNA (645bp) protein (215aa)
NUDIX hydrolase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW43_9BURK
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:AFU45067.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3044_curated_8
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4374..5360
DNA (987bp) protein (329aa)
Cobalamin biosynthesis protein CobD n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPZ2_9BURK
cobalamin biosynthesis protein CbiB
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3044_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5410..6354)
DNA (945bp) protein (315aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1P7_9BURK
ribosome small subunit-dependent GTPase A
SCNpilot_expt_1000_bf_scaffold_3044_curated_10
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6367..6705)
DNA (339bp) protein (113aa)
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ71_9BURK
pterin-4-alpha-carbinolamine dehydratase
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_expt_1000_bf_scaffold_3044_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6702..8009)
DNA (1308bp) protein (436aa)
Ste24 endopeptidase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7Z0_9BURK
Ste24 endopeptidase
Ste24 endopeptidase {ECO:0000313|EMBL:AFU45071.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3044_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8038..8640
DNA (603bp) protein (201aa)
oligoribonuclease (EC:3.1.-.-)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Oligoribonuclease n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW47_9BURK
SCNpilot_expt_1000_bf_scaffold_3044_curated_13
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9034..10893
DNA (1860bp) protein (620aa)
DEAD/DEAH box helicase domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPZ6_9BURK
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:AFU45073.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
DEAD/DEAH box helicase
SCNpilot_expt_1000_bf_scaffold_3044_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11044..12516
DNA (1473bp) protein (491aa)
PAS/PAC sensor-containing diguanylate cyclase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1Q1_9BURK
PAS/PAC sensor-containing diguanylate cyclase
PAS/PAC sensor-containing diguanylate cyclase {ECO:0000313|EMBL:AFU45074.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3044_curated_15
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12529..13761)
DNA (1233bp) protein (411aa)
Bcr/CflA subfamily drug resistance transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZ76_9BURK
Bcr/CflA subfamily drug resistance transporter
Bcr/CflA subfamily drug resistance transporter {ECO:0000313|EMBL:AFU45075.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_3044_curated_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13934..15511)
DNA (1578bp) protein (526aa)
Cellulose synthase operon protein YhjU n=1 Tax=Acidovorax sp. CF316 RepID=J1ECH4_9BURK
Cellulose synthase operon protein YhjU {ECO:0000313|EMBL:EJE50096.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3044_curated_17
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15508..17703)
DNA (2196bp) protein (732aa)
cellulose synthase catalytic subunit; K00694 cellulose synthase (UDP-forming) [EC:2.4.1.12]
Cellulose synthase catalytic subunit (UDP-forming) n=1 Tax=Acidovorax sp. CF316 RepID=J0K935_9BURK
Cellulose synthase catalytic subunit (UDP-forming) {ECO:0000313|EMBL:EJE50095.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
SCNpilot_expt_1000_bf_scaffold_3044_curated_18
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18029..18469)
DNA (441bp) protein (147aa)
Cellulose synthase operon protein YhjQ n=1 Tax=Acidovorax sp. CF316 RepID=J1ECX2_9BURK
Cellulose synthase operon protein YhjQ {ECO:0000313|EMBL:EJE50094.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
Displaying 18 items

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