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SCNpilot_expt_1000_bf_scaffold_2692_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2692_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1263)
DNA (1263bp) protein (421aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1A3_9BURK
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:AFU44989.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2692_curated_2
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1367..3109)
DNA (1743bp) protein (581aa)
Fecr protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYX8_9BURK
Fecr protein {ECO:0000313|EMBL:AFU44990.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
fecr protein
SCNpilot_expt_1000_bf_scaffold_2692_curated_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3162..3860)
DNA (699bp) protein (233aa)
Winged helix family two component transcriptional regulator n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7R6_9BURK
winged helix family two component transcriptional regulator
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:AFU44991.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2692_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3979..4986)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVY0_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44992.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2692_curated_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5034..5294)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPQ7_9BURK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44993.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2692_curated_6
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5474..7477
DNA (2004bp) protein (668aa)
adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1]
Family 3 adenylate cyclase n=1 Tax=Acidovorax sp. CF316 RepID=J0KCY9_9BURK
Family 3 adenylate cyclase {ECO:0000313|EMBL:EJE51465.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
SCNpilot_expt_1000_bf_scaffold_2692_curated_7
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7513..9885
DNA (2373bp) protein (791aa)
Flp pilus assembly protein TadD n=1 Tax=Acidovorax sp. CF316 RepID=J1EGW4_9BURK
Flp pilus assembly protein TadD {ECO:0000313|EMBL:EJE51464.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
TPR repeat-containing protein
SCNpilot_expt_1000_bf_scaffold_2692_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9843..10913
DNA (1071bp) protein (357aa)
Flp pilus assembly protein TadD n=1 Tax=Acidovorax sp. CF316 RepID=J1EGW4_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_expt_1000_bf_scaffold_2692_curated_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11123..12424)
DNA (1302bp) protein (434aa)
tryptophanyl-tRNA ligase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Tryptophan--tRNA ligase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1C1_9BURK
SCNpilot_expt_1000_bf_scaffold_2692_curated_10
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12484..13152)
DNA (669bp) protein (223aa)
Peptidase m50 n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYY6_9BURK
peptidase m50
Peptidase m50 {ECO:0000313|EMBL:AFU44995.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2692_curated_11
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13408..14556
DNA (1149bp) protein (383aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7S6_9BURK
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AFU44996.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2692_curated_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14699..15334)
DNA (636bp) protein (212aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVY4_9BURK
Sua5/YciO/YrdC/YwlC family protein
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:AFU44997.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2692_curated_13
unknown

Not on your lists

comp(15346..15435)
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2692_curated_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15432..16289)
DNA (858bp) protein (286aa)
PHP domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HPR3_9BURK
PHP domain-containing protein
PHP domain-containing protein {ECO:0000313|EMBL:AFU44998.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_expt_1000_bf_scaffold_2692_curated_15
unknown

Not on your lists

comp(16927..17172)
DNA (246bp) protein (82aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2692_curated_16
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17227..17886)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FRF3_9BURK
Uncharacterised protein {ECO:0000313|EMBL:CRD94243.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
hok; hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2692_curated_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18370..18594
DNA (225bp) protein (75aa)
tautomerase n=1 Tax=Acidovorax radicis RepID=UPI000237552B
4-oxalocrotonate tautomerase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_expt_1000_bf_scaffold_2692_curated_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18606..20330)
DNA (1725bp) protein (575aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7T3_9BURK
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:AFU45001.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
single-stranded-DNA-specific exonuclease RecJ
SCNpilot_expt_1000_bf_scaffold_2692_curated_19
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20327..21235)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVY6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AFU45002.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
hypothetical protein
Displaying 19 items

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